'STRAP:multiple sequence alignments '

charite.christo.protein
Class Backtranslate

java.lang.Object
  extended by charite.christo.protein.Backtranslate

public class Backtranslate
extends java.lang.Object


Nested Class Summary
static class Backtranslate.Codonusage
           
 
Field Summary
static java.lang.String[] ORGANISMS
           
 
Constructor Summary
Backtranslate()
           
 
Method Summary
static byte[] backtranslate(byte[] aa, int end, Backtranslate.Codonusage usage, boolean uracil)
           
static Backtranslate.Codonusage codonUsage(java.lang.String name)
           
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Field Detail

ORGANISMS

public static final java.lang.String[] ORGANISMS
Constructor Detail

Backtranslate

public Backtranslate()
Method Detail

codonUsage

public static Backtranslate.Codonusage codonUsage(java.lang.String name)

backtranslate

public static byte[] backtranslate(byte[] aa,
                                   int end,
                                   Backtranslate.Codonusage usage,
                                   boolean uracil)

'STRAP:multiple sequence alignments '

'The most important classes are StrapAlign, Protein and StrapEvent.'