|
'STRAP:multiple sequence alignments ' | ||||||||
PREV CLASS NEXT CLASS | FRAMES NO FRAMES | ||||||||
SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD |
java.lang.Object charite.christo.protein.StupidParser
public class StupidParser
HELP This parser is indeed stupid. It takes all letters as amino acids.
Field Summary |
---|
Fields inherited from interface charite.christo.protein.ProteinParser |
---|
IGNORE_SEQRES, SEQUENCE_FEATURES, SIDE_CHAIN_ATOMS |
Constructor Summary | |
---|---|
StupidParser()
|
Method Summary | |
---|---|
boolean |
parse(Protein p,
long options,
BA byteArray)
|
Methods inherited from class java.lang.Object |
---|
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
---|
public StupidParser()
Method Detail |
---|
public boolean parse(Protein p, long options, BA byteArray)
parse
in interface ProteinParser
byteArray
- the entire file contents
It is a byte array and not a String Object for performance reasons.
|
'STRAP:multiple sequence alignments ' | ||||||||
PREV CLASS NEXT CLASS | FRAMES NO FRAMES | ||||||||
SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD |