charite.christo.strap
Class AcceptAlignment2
java.lang.Object
charite.christo.strap.AcceptAlignment2
public class AcceptAlignment2
- extends java.lang.Object
Methods inherited from class java.lang.Object |
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
AcceptAlignment2
public AcceptAlignment2(Protein[] pp,
int startCol,
byte[][] alignment)
eliminateCommonGaps
public static int eliminateCommonGaps(Protein[] pp,
int startCol,
int endCol,
byte[][] alignment,
int[] wide2narrow)
delGaps
public static void delGaps(Protein[] pp,
int startCol,
int endCol,
byte[][] alignment)
getCountInserts
public int[] getCountInserts()
'The most important classes are StrapAlign, Protein and StrapEvent.'