'STRAP:multiple sequence alignments '

charite.christo
Class TextMatches

java.lang.Object
  extended by charite.christo.TextMatches

public class TextMatches
extends java.lang.Object


Constructor Summary
TextMatches()
           
TextMatches(long options, int[] fromTo, int count, java.lang.Object c_or_i)
           
 
Method Summary
 void add(int from, int to)
           
 TextMatches clear()
           
 java.awt.Color color()
           
 java.lang.Object colorOrIcon()
           
 int count()
           
 boolean[] delimiterL()
           
 boolean[] delimiterR()
           
 int[] fromTo()
           
 int[] fromToTrim()
           
 java.lang.Object needle()
           
 long options()
           
 void setDelimiters(boolean[] dL, boolean[] dR)
           
 void setFromTo(int[] fromTo, int count)
           
 void setNeedle(java.lang.Object n)
           
 void setOptions(long opt)
           
 int[] yy(java.lang.Object jc)
           
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

TextMatches

public TextMatches()

TextMatches

public TextMatches(long options,
                   int[] fromTo,
                   int count,
                   java.lang.Object c_or_i)
Method Detail

setFromTo

public void setFromTo(int[] fromTo,
                      int count)

add

public void add(int from,
                int to)

clear

public TextMatches clear()

setDelimiters

public void setDelimiters(boolean[] dL,
                          boolean[] dR)

setNeedle

public void setNeedle(java.lang.Object n)

setOptions

public void setOptions(long opt)

fromTo

public int[] fromTo()

fromToTrim

public int[] fromToTrim()

count

public int count()

delimiterL

public boolean[] delimiterL()

delimiterR

public boolean[] delimiterR()

options

public long options()

needle

public java.lang.Object needle()

colorOrIcon

public java.lang.Object colorOrIcon()

color

public java.awt.Color color()

yy

public int[] yy(java.lang.Object jc)

'STRAP:multiple sequence alignments '

'The most important classes are StrapAlign, Protein and StrapEvent.'