Overview
Package
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'STRAP:
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All Classes
Hierarchy For Package charite.christo
Package Hierarchies:
All Packages
Class Hierarchy
java.lang.Object
javax.swing.border.AbstractBorder (implements javax.swing.border.Border, java.io.Serializable)
charite.christo.
ChRenderer
(implements javax.swing.ListCellRenderer, charite.christo.
PaintHook
, charite.christo.
ProcessEv
, javax.swing.table.TableCellEditor, javax.swing.table.TableCellRenderer, javax.swing.tree.TreeCellRenderer)
charite.christo.
AbstractInteractiveFileProcessor
(implements java.awt.event.ActionListener)
charite.christo.
NCBI_separateEntries
charite.christo.
PDB_separateChains
charite.christo.
AbstractProxy
(implements charite.christo.
HasPropertyMap
)
charite.christo.
AnonymousFTPPROXY
charite.christo.
ChCompilerJavacPROXY
charite.christo.
ChHttpClientPROXY
charite.christo.
ChJOrthoPROXY
(implements charite.christo.
ChRunnable
)
charite.christo.
ChPdfUtilsPROXY
charite.christo.
ChTarPROXY
javax.swing.table.AbstractTableModel (implements java.io.Serializable, javax.swing.table.TableModel)
charite.christo.
ChTableModel
charite.christo.
AnonymousFTP
(implements charite.christo.
ChRunnable
)
charite.christo.
AnsiEscape
charite.christo.
Archive
charite.christo.
BA
(implements java.lang.CharSequence, charite.christo.
ChRunnable
, java.lang.Comparable<T>, charite.christo.
HasModiCount
, charite.christo.
HasPropertyMap
)
charite.christo.
BasicExecutable
(implements charite.christo.
CanBeStopped
, charite.christo.
ChRunnable
, charite.christo.
Disposable
, charite.christo.
HasControlPanel
)
charite.christo.
NativeTools
charite.christo.
CacheResult
(implements charite.christo.
ChRunnable
)
charite.christo.
ChAppleScript
charite.christo.
ChCatdoc
charite.christo.
ChCodeViewer
charite.christo.
ChComparator
(implements java.util.Comparator<T>)
charite.christo.
ChCompilerJavac
(implements charite.christo.
ChRunnable
)
charite.christo.
ChConstants
charite.christo.
ChEnv
charite.christo.
ChExec
(implements java.awt.event.ActionListener, charite.christo.
ChRunnable
, charite.christo.
HasControlPanel
, java.lang.Runnable)
charite.christo.
ChExecSecurity
charite.christo.
ChHttpClient
(implements charite.christo.
ChRunnable
)
charite.christo.
ChInStream
charite.christo.
ChJavadoc
(implements java.awt.event.ActionListener)
charite.christo.
ChJnlp
charite.christo.
ChJOrtho
(implements charite.christo.
ChRunnable
, com.inet.jortho.CustomDictionaryProvider)
charite.christo.
ChLogger
(implements java.awt.event.ActionListener, charite.christo.
ChRunnable
, charite.christo.
HasPanel
)
charite.christo.
ChMap
<K,V> (implements charite.christo.
ChRunnable
, charite.christo.
HasModiCount
, java.util.Map<K,V>)
charite.christo.
ChMsg
(implements charite.christo.
ChRunnable
)
charite.christo.
ChMsgDia
(implements java.awt.event.ActionListener, java.lang.Runnable)
charite.christo.
ChPdfUtils
(implements charite.christo.
ChRunnable
)
charite.christo.
ChPubmed
(implements java.awt.event.ActionListener, charite.christo.
ChRunnable
)
charite.christo.
ChRegex
charite.christo.
ChScriptPanel
(implements java.awt.event.ActionListener, javax.swing.event.CaretListener)
charite.christo.
ChSet
<E> (implements charite.christo.
HasModiCount
, java.util.Set<E>)
charite.christo.
ChSprite
(implements java.lang.Runnable)
charite.christo.
ChStdout
(implements java.awt.event.ActionListener, charite.christo.
ChRunnable
)
charite.christo.
ChTar
(implements charite.christo.
ChRunnable
)
charite.christo.
ChTextComponents
(implements charite.christo.
ChRunnable
, javax.swing.event.DocumentListener, charite.christo.
HasModiCount
, charite.christo.
PaintHook
, charite.christo.
ProcessEv
, javax.swing.event.UndoableEditListener)
charite.christo.
ChTextReplacement
charite.christo.
ChThread
(implements java.lang.Runnable)
charite.christo.
ChTokenizer
charite.christo.
ChTransferable
(implements java.awt.datatransfer.Transferable)
charite.christo.
ChTreeModel
(implements javax.swing.tree.TreeModel)
charite.christo.
ChUtils
(implements charite.christo.
ChRunnable
, charite.christo.
ProcessEv
)
charite.christo.
ChUtils.EvLi
(implements javax.swing.event.ListSelectionListener, javax.swing.event.PopupMenuListener, javax.swing.event.TreeSelectionListener)
charite.christo.
ChZip
java.lang.ClassLoader
java.security.SecureClassLoader
java.net.URLClassLoader
charite.christo.
ChClassLoader1
(implements charite.christo.
HasWeakRef
)
java.awt.Component (implements java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable)
java.awt.Container
javax.swing.JComponent (implements java.io.Serializable)
javax.swing.AbstractButton (implements java.awt.ItemSelectable, javax.swing.SwingConstants)
javax.swing.JButton (implements javax.accessibility.Accessible)
charite.christo.
ChButton
(implements charite.christo.
ChRunnable
, charite.christo.
HasModiCount
, charite.christo.
HasRenderer
, charite.christo.
ProcessEv
)
charite.christo.
ButColor
charite.christo.
FreeMemoryBar
(implements java.lang.Runnable)
javax.swing.JMenuItem (implements javax.accessibility.Accessible, javax.swing.MenuElement)
charite.christo.
ChButton.MItem
javax.swing.JMenu (implements javax.accessibility.Accessible, javax.swing.MenuElement)
charite.christo.
ChJMenu
(implements javax.swing.event.MenuListener, charite.christo.
ProcessEv
)
javax.swing.JToggleButton (implements javax.accessibility.Accessible)
javax.swing.JCheckBox (implements javax.accessibility.Accessible)
charite.christo.
ChJCheckBox
javax.swing.JComboBox (implements javax.accessibility.Accessible, java.awt.event.ActionListener, java.awt.ItemSelectable, javax.swing.event.ListDataListener)
charite.christo.
ChCombo
(implements charite.christo.
HasModiCount
, charite.christo.
IsEnabled
, charite.christo.
ProcessEv
, java.lang.Runnable)
javax.swing.JFileChooser (implements javax.accessibility.Accessible)
charite.christo.
ChFileChooser
(implements charite.christo.
ChRunnable
, charite.christo.
Disposable
, charite.christo.
ProcessEv
, java.beans.PropertyChangeListener, java.lang.Runnable)
javax.swing.JList (implements javax.accessibility.Accessible, javax.swing.Scrollable)
charite.christo.
ChJList
(implements charite.christo.
HasModiCount
, charite.christo.
IsEnabled
, charite.christo.
ProcessEv
)
javax.swing.JMenuBar (implements javax.accessibility.Accessible, javax.swing.MenuElement)
charite.christo.
ChJMenuBar
javax.swing.JPanel (implements javax.accessibility.Accessible)
charite.christo.
ChPanel
(implements javax.swing.Scrollable)
charite.christo.
ChTableLayout
(implements charite.christo.
ChRunnable
, charite.christo.
PaintHook
, charite.christo.
ProcessEv
, javax.swing.table.TableCellRenderer, charite.christo.
TooltipProvider
)
charite.christo.
ChTabPane
(implements java.util.Comparator<T>, charite.christo.
PaintHook
, charite.christo.
PreferredSize
, charite.christo.
ProcessEv
)
charite.christo.
ChTextView
(implements charite.christo.
ChRunnable
)
charite.christo.
DialogExecuteOnFile
(implements java.awt.event.ActionListener)
charite.christo.
GraphSun
(implements java.awt.event.ActionListener, charite.christo.
Disposable
, java.lang.Runnable)
charite.christo.
RenameFile
(implements java.awt.event.ActionListener)
charite.christo.
ScrollLabel
javax.swing.JScrollBar (implements javax.accessibility.Accessible, java.awt.Adjustable)
charite.christo.
ChScrollBar
javax.swing.JScrollPane (implements javax.accessibility.Accessible, javax.swing.ScrollPaneConstants)
charite.christo.
ChJScrollPane
(implements charite.christo.
PaintHook
, charite.christo.
ProcessEv
)
javax.swing.JSlider (implements javax.accessibility.Accessible, javax.swing.SwingConstants)
charite.christo.
ChSlider
(implements javax.swing.event.ChangeListener, charite.christo.
HasModiCount
, java.awt.event.MouseWheelListener)
javax.swing.JTable (implements javax.accessibility.Accessible, javax.swing.event.CellEditorListener, javax.swing.event.ListSelectionListener, javax.swing.event.RowSorterListener, javax.swing.Scrollable, javax.swing.event.TableColumnModelListener, javax.swing.event.TableModelListener)
charite.christo.
ChJTable
(implements java.util.Comparator<T>, charite.christo.
ProcessEv
)
javax.swing.text.JTextComponent (implements javax.accessibility.Accessible, javax.swing.Scrollable)
javax.swing.JEditorPane
javax.swing.JTextPane
charite.christo.
ChJTextPane
javax.swing.JTextArea
charite.christo.
ChTextArea
(implements charite.christo.
ChRunnable
, java.lang.Runnable)
javax.swing.JTextField (implements javax.swing.SwingConstants)
charite.christo.
ChTextField
javax.swing.JTree (implements javax.accessibility.Accessible, javax.swing.Scrollable)
charite.christo.
ChJTree
(implements charite.christo.
HasWeakRef
)
charite.christo.
RendererNumberAsOval
(implements javax.swing.table.TableCellRenderer)
java.awt.Window (implements javax.accessibility.Accessible)
java.awt.Frame (implements java.awt.MenuContainer)
javax.swing.JFrame (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
charite.christo.
ChFrame
(implements charite.christo.
ProcessEv
)
javax.swing.plaf.ComponentUI
javax.swing.plaf.ScrollBarUI
javax.swing.plaf.basic.BasicScrollBarUI (implements java.awt.LayoutManager, javax.swing.SwingConstants)
javax.swing.plaf.metal.MetalScrollBarUI
apple.laf.AquaScrollBarUI
charite.christo.
ChAquaScrollBarUI
charite.christo.
ChMetalScrollBarUI
com.sun.java.swing.plaf.windows.WindowsScrollBarUI
charite.christo.
ChWindowsScrollBarUI
charite.christo.
Customize
(implements java.awt.event.ActionListener, charite.christo.
ChRunnable
, charite.christo.
HasModiCount
, charite.christo.
HasPanel
)
javax.swing.DefaultListSelectionModel (implements java.lang.Cloneable, javax.swing.ListSelectionModel, java.io.Serializable)
charite.christo.
ChListSelectionModel
charite.christo.
DesktopUtils
(implements java.awt.dnd.DropTargetListener)
charite.christo.
DialogFindInText
(implements charite.christo.
Disposable
, charite.christo.
ProcessEv
)
charite.christo.
DialogStringMatch
(implements java.awt.event.ActionListener, charite.christo.
HasPanel
)
charite.christo.
DNA_Util
javax.swing.text.EditorKit (implements java.lang.Cloneable, java.io.Serializable)
javax.swing.text.DefaultEditorKit
javax.swing.text.StyledEditorKit
javax.swing.text.html.HTMLEditorKit (implements javax.accessibility.Accessible)
charite.christo.
HtmlDocEditorKit
(implements javax.swing.text.ViewFactory)
charite.christo.
EvAdapter
(implements java.awt.event.ActionListener, javax.swing.event.ChangeListener, java.awt.event.ComponentListener, java.awt.event.FocusListener, java.awt.event.ItemListener, java.awt.event.KeyListener, javax.swing.event.ListSelectionListener, java.awt.event.MouseListener, java.awt.event.MouseMotionListener, java.awt.event.MouseWheelListener)
charite.christo.
ExecByRegex
(implements charite.christo.
ChRunnable
, charite.christo.
ProcessEv
)
java.io.File (implements java.lang.Comparable<T>, java.io.Serializable)
charite.christo.
ChFile
charite.christo.
FileEditorEclipse
(implements charite.christo.
ChRunnable
, charite.christo.
FileEditor
)
javax.swing.filechooser.FileFilter
charite.christo.
ChFileFilter
(implements java.io.FileFilter)
charite.christo.
FilePopup
(implements javax.swing.event.PopupMenuListener, charite.christo.
ProcessEv
, charite.christo.
TooltipProvider
)
charite.christo.
FullClassName
charite.christo.
GraphEdge
charite.christo.
GraphNode
charite.christo.
HelpCommands
charite.christo.
Hex2bin
charite.christo.
HtmlDoc
(implements javax.swing.event.HyperlinkListener)
charite.christo.
HtmlDocElement
(implements charite.christo.
HasRenderer
)
charite.christo.
HtmlUtil
charite.christo.
Hyperrefs
java.awt.image.ImageFilter (implements java.lang.Cloneable, java.awt.image.ImageConsumer)
java.awt.image.RGBImageFilter
charite.christo.
ChIcon
(implements charite.christo.
ChRunnable
)
charite.christo.
Insecure
charite.christo.
InteractiveDownload
(implements charite.christo.
ChRunnable
)
charite.christo.
J_JavaEditor
(implements charite.christo.
FileEditor
)
charite.christo.
JListModel
(implements javax.swing.ComboBoxModel)
charite.christo.
LAFChooser
(implements java.awt.event.ActionListener, java.beans.PropertyChangeListener)
javax.swing.text.LayeredHighlighter (implements javax.swing.text.Highlighter)
javax.swing.text.DefaultHighlighter
charite.christo.
ChJHighlighter
charite.christo.
ListOrTreeNeedsRepaint
charite.christo.
Microsoft
(implements java.awt.event.ActionListener, charite.christo.
ChRunnable
)
java.awt.event.MouseAdapter (implements java.awt.event.MouseListener, java.awt.event.MouseMotionListener, java.awt.event.MouseWheelListener)
charite.christo.
CollapseComponent
(implements java.awt.event.AdjustmentListener, charite.christo.
ChRunnable
, java.awt.event.MouseMotionListener)
charite.christo.
OccurInText
charite.christo.
PrgParas
charite.christo.
PrgParasGUI
(implements java.awt.event.ActionListener)
charite.christo.
Range
charite.christo.
Ratio
charite.christo.
Sil
(implements charite.christo.
ChRunnable
)
charite.christo.
SourcefilesInJarfile
(implements charite.christo.
ProcessEv
)
charite.christo.
Strings2Tree
(implements charite.christo.
ChRunnable
)
charite.christo.
TabItemTipIcon
charite.christo.
TextMatches
java.lang.Thread (implements java.lang.Runnable)
charite.christo.
ChDelay
(implements charite.christo.
ChRunnable
)
charite.christo.
ChJarSignersHardLinker
charite.christo.
UniqueList
<T> (implements charite.christo.
ChRunnable
, charite.christo.
HasModiCount
, charite.christo.
HasPropertyMap
, charite.christo.
HasRenderer
, java.util.List<E>)
charite.christo.
Web
(implements charite.christo.
ChRunnable
)
Interface Hierarchy
charite.christo.
CanBeStopped
charite.christo.
ChRunnable
charite.christo.
Colored
charite.christo.
CommandInterpreter
charite.christo.
Disposable
charite.christo.
FileEditor
charite.christo.
FloatValue
charite.christo.
HasControlPanel
charite.christo.
HasID
charite.christo.
HasImage
charite.christo.
HasModiCount
charite.christo.
HasName
charite.christo.
HasNativeExec
charite.christo.
HasPanel
charite.christo.
HasPropertyMap
charite.christo.
HasRenderer
charite.christo.
HasRendererModiCount
charite.christo.
HasScore
charite.christo.
HasWeakRef
charite.christo.
IsEnabled
charite.christo.
NeedsInternet
charite.christo.
NeedsSharedInstance
charite.christo.
HasPrgParas
charite.christo.
HasSharedControlPanel
charite.christo.
PaintHook
charite.christo.
PreferredSize
charite.christo.
ProcessEv
charite.christo.
TooltipProvider
charite.christo.
WhenCreatedWhenModified
Overview
Package
Class
Tree
Deprecated
Index
Help
'STRAP:
multiple sequence alignments
'
PREV
NEXT
FRAMES
NO FRAMES
All Classes
'The most important classes are StrapAlign, Protein and StrapEvent.'