'STRAP:multiple sequence alignments '

charite.christo
Class ChTarPROXY

java.lang.Object
  extended by charite.christo.AbstractProxy
      extended by charite.christo.ChTarPROXY
All Implemented Interfaces:
HasPropertyMap

public class ChTarPROXY
extends AbstractProxy

HELP Home: http://www.gjt.org/servlets/JCVSlet/list/ice/com/ice/tar/
License of tar.zip: tar/doc/LICENSE says: "...You are free to use this work in any way you wish..."


Field Summary
 
Fields inherited from class charite.christo.AbstractProxy
ACTIVATION, ADAPTERS_JAR, BIOJAVA_3D, COMMONS_COLLECTIONS, GLUGEN, JCOMMON, JOGL, LOG4J, PFX_INSTALLED, TRY_BOOT_CLASSLOADER
 
Constructor Summary
ChTarPROXY()
           
 
Method Summary
 void extractAll(java.io.File fTar, java.io.File dir)
           
 java.lang.String getRequiredJars()
           
 
Methods inherited from class charite.christo.AbstractProxy
dispose, disposeProxy, getControlPanel, getPrgParas, getPropertyMap, getProxy, getScore, getSharedControlPanel, getSharedInstance, interpret, jarFile, jarsContainingNativeLibraries, proxyObject, proxyObjectRun, remoteURLs, setOptions, setSharedInstance, usrShareJava
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

ChTarPROXY

public ChTarPROXY()
Method Detail

getRequiredJars

public java.lang.String getRequiredJars()
Specified by:
getRequiredJars in class AbstractProxy

extractAll

public void extractAll(java.io.File fTar,
                       java.io.File dir)

'STRAP:multiple sequence alignments '

'The most important classes are StrapAlign, Protein and StrapEvent.'