'STRAP:multiple sequence alignments '

charite.christo
Class NativeTools

java.lang.Object
  extended by charite.christo.BasicExecutable
      extended by charite.christo.NativeTools
All Implemented Interfaces:
CanBeStopped, ChRunnable, Disposable, HasControlPanel

public class NativeTools
extends BasicExecutable


Field Summary
 
Fields inherited from class charite.christo.BasicExecutable
DEFAULT_BINARY, PFX_ADD_INCLUDE_LIMITS, PFX_DPKG, PFX_FIX_INCLUDE, REPLACEME_INLCUDE_STRING, RPLC_WIN_DOT_EXE
 
Fields inherited from interface charite.christo.CanBeStopped
vALIGNMENTS
 
Fields inherited from interface charite.christo.Disposable
NONE
 
Fields inherited from interface charite.christo.ChRunnable
APPEND, COLUMN_TITLE, DOWNLOAD_FINISHED, GET_PANEL, ICON, INTERPRET_LINE, IS_DRAG4XY, ITEM_TEXT, MODIFY_RENDERER_COMPONENT, PROGRESS, REPAINT_CURSOR, SAY_DOWNLOADING, SET_ICON_IMAGE, SET_TREE_VALUE, SHOW_IN_FRAME, TAB_TEXT, TIP_TEXT
 
Constructor Summary
NativeTools()
           
 
Method Summary
 void installPackage()
           
static void setWindowState(char m, int x, int y, java.lang.String... title)
           
 
Methods inherited from class charite.christo.BasicExecutable
checkForUpdates, defineParameters, dirBinaries, dirTemp, dispose, exec, exec, failedToLaunch, fileExecutable, fileIn, fileOut, getControlPanel, getName, getPrgParas, getSharedInstance, init, initExecutable, installBioPerl, isBioPerlInstalled, isPerlInstalled, isStopped, msgInstallCompilers, perlCommand, run, setBinaryPackageURLs, setFileExecutable, setName, setSharedInstance, setSourceInstallationScript, setSourcePackageURLs, stop, toString
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, wait, wait, wait
 

Constructor Detail

NativeTools

public NativeTools()
Method Detail

setWindowState

public static void setWindowState(char m,
                                  int x,
                                  int y,
                                  java.lang.String... title)

installPackage

public void installPackage()
Overrides:
installPackage in class BasicExecutable

'STRAP:multiple sequence alignments '

'The most important classes are StrapAlign, Protein and StrapEvent.'