'STRAP:multiple sequence alignments '

charite.christo
Class AbstractInteractiveFileProcessor

java.lang.Object
  extended by charite.christo.AbstractInteractiveFileProcessor
All Implemented Interfaces:
java.awt.event.ActionListener, java.util.EventListener
Direct Known Subclasses:
NCBI_separateEntries, PDB_separateChains

public abstract class AbstractInteractiveFileProcessor
extends java.lang.Object
implements java.awt.event.ActionListener


Constructor Summary
AbstractInteractiveFileProcessor()
           
 
Method Summary
 void actionPerformed(java.awt.event.ActionEvent ev)
           
abstract  java.lang.String fileEntry(BA byteArray, java.io.File f)
           
 java.io.File[] getCreatedFiles()
           
 void interactiveProcess(java.io.File... ff)
           
abstract  java.io.File[] processFile(BA byteArray, java.io.File file, boolean overwrite)
           
 void setErrorNonSelected(java.lang.String s)
           
 void setTextNorth(java.lang.String s)
           
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

AbstractInteractiveFileProcessor

public AbstractInteractiveFileProcessor()
Method Detail

getCreatedFiles

public java.io.File[] getCreatedFiles()

actionPerformed

public void actionPerformed(java.awt.event.ActionEvent ev)
Specified by:
actionPerformed in interface java.awt.event.ActionListener

interactiveProcess

public void interactiveProcess(java.io.File... ff)

fileEntry

public abstract java.lang.String fileEntry(BA byteArray,
                                           java.io.File f)

setTextNorth

public void setTextNorth(java.lang.String s)

setErrorNonSelected

public void setErrorNonSelected(java.lang.String s)

processFile

public abstract java.io.File[] processFile(BA byteArray,
                                           java.io.File file,
                                           boolean overwrite)

'STRAP:multiple sequence alignments '

'The most important classes are StrapAlign, Protein and StrapEvent.'