'STRAP:multiple sequence alignments '

charite.christo
Class ChJOrthoPROXY

java.lang.Object
  extended by charite.christo.AbstractProxy
      extended by charite.christo.ChJOrthoPROXY
All Implemented Interfaces:
ChRunnable, HasPropertyMap

public class ChJOrthoPROXY
extends AbstractProxy
implements ChRunnable

HELP Home:http://www.inetsoftware.de/other-products/jortho
License of JOrtho: GPL


Field Summary
static java.lang.String DICT_FILE
           
static java.lang.String JTEXTCOMPONENT
           
static java.lang.String RUN_DOWNLOAD_WORDS
           
 
Fields inherited from class charite.christo.AbstractProxy
ACTIVATION, ADAPTERS_JAR, BIOJAVA_3D, COMMONS_COLLECTIONS, GLUGEN, JCOMMON, JOGL, LOG4J, PFX_INSTALLED, TRY_BOOT_CLASSLOADER
 
Fields inherited from interface charite.christo.ChRunnable
APPEND, COLUMN_TITLE, DOWNLOAD_FINISHED, GET_PANEL, ICON, INTERPRET_LINE, IS_DRAG4XY, ITEM_TEXT, MODIFY_RENDERER_COMPONENT, PROGRESS, REPAINT_CURSOR, SAY_DOWNLOADING, SET_ICON_IMAGE, SET_TREE_VALUE, SHOW_IN_FRAME, TAB_TEXT, TIP_TEXT
 
Constructor Summary
ChJOrthoPROXY()
           
 
Method Summary
static void addDictionaries(java.lang.String[] ss)
           
static void addWords(java.lang.Object o)
          Argument: An String or HasName or ChRunnable or an Array or Collection of them.
 java.lang.String getRequiredJars()
           
 void register(javax.swing.text.JTextComponent tc)
           
 java.lang.Object run(java.lang.String id, java.lang.Object arg)
           
static java.lang.Thread thread_addDictionaries(java.lang.String[] ss)
           
 
Methods inherited from class charite.christo.AbstractProxy
dispose, disposeProxy, getControlPanel, getPrgParas, getPropertyMap, getProxy, getScore, getSharedControlPanel, getSharedInstance, interpret, jarFile, jarsContainingNativeLibraries, proxyObject, proxyObjectRun, remoteURLs, setOptions, setSharedInstance, usrShareJava
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Field Detail

JTEXTCOMPONENT

public static final java.lang.String JTEXTCOMPONENT
See Also:
Constant Field Values

DICT_FILE

public static final java.lang.String DICT_FILE
See Also:
Constant Field Values

RUN_DOWNLOAD_WORDS

public static final java.lang.String RUN_DOWNLOAD_WORDS
See Also:
Constant Field Values
Constructor Detail

ChJOrthoPROXY

public ChJOrthoPROXY()
Method Detail

getRequiredJars

public java.lang.String getRequiredJars()
Specified by:
getRequiredJars in class AbstractProxy

register

public void register(javax.swing.text.JTextComponent tc)

addWords

public static void addWords(java.lang.Object o)
Argument: An String or HasName or ChRunnable or an Array or Collection of them.


thread_addDictionaries

public static java.lang.Thread thread_addDictionaries(java.lang.String[] ss)

addDictionaries

public static void addDictionaries(java.lang.String[] ss)

run

public java.lang.Object run(java.lang.String id,
                            java.lang.Object arg)
Specified by:
run in interface ChRunnable

'STRAP:multiple sequence alignments '

'The most important classes are StrapAlign, Protein and StrapEvent.'