'STRAP:multiple sequence alignments '

charite.christo
Class ChConstants

java.lang.Object
  extended by charite.christo.ChConstants

public class ChConstants
extends java.lang.Object


Field Summary
static java.lang.String _CC
           
static java.lang.String _CCB
           
static java.lang.String _CCM
           
static java.lang.String _CCP
           
static java.lang.String _CCS
           
static java.lang.String _CCSE
           
static java.lang.String _CCSSC
           
static java.lang.String ACTION_CHANGE_EVENT
           
static java.lang.String ACTION_CLICKED
           
static java.lang.String ACTION_CLICKED_AFTER_SUPER
           
static java.lang.String ACTION_CLICKED_DOUBLE
           
static java.lang.String ACTION_CLICKED_DOUBLE_AFTER_SUPER
           
static java.lang.String ACTION_COLOR_CHANGED
           
static java.lang.String ACTION_CUSTOMIZE_CHANGED
           
static java.lang.String ACTION_DATABASE_CLICKED
           
static java.lang.String ACTION_DELETE_OR_BACKSPACE
           
static java.lang.String ACTION_DOWNLOAD_PLUGIN
           
static java.lang.String ACTION_ENTER
           
static java.lang.String ACTION_FOCUS_GAINED
           
static java.lang.String ACTION_FOCUS_LOST
           
static java.lang.String ACTION_MENU_SELECTED
           
static java.lang.String ACTION_SELECTION_CHANGED
           
static java.lang.String ACTION_TABLE_CHANGED
           
static java.lang.String ACTION_TEXT_CHANGED
           
static java.lang.String ACTION_WINDOW_ACTIVATED
           
static java.lang.String ACTION_WINDOW_CLOSING
           
static java.lang.String ACTION_WINDOW_DEACTIVATED
           
static java.lang.String ANSI_BLACK
           
static java.lang.String ANSI_BLUE
           
static java.lang.String ANSI_BOLD
           
static java.lang.String ANSI_CYAN
           
static java.lang.String ANSI_FG_BLACK
           
static java.lang.String ANSI_FG_BLUE
           
static java.lang.String ANSI_FG_CYAN
           
static java.lang.String ANSI_FG_GREEN
           
static java.lang.String ANSI_FG_MAGENTA
           
static java.lang.String ANSI_FG_RED
           
static java.lang.String ANSI_FG_WHITE
           
static java.lang.String ANSI_FG_YELLOW
           
static java.lang.String ANSI_GREEN
           
static java.lang.String ANSI_MAGENTA
           
static java.lang.String ANSI_RED
           
static java.lang.String ANSI_RESET
           
static java.lang.String ANSI_TERMINAL
           
static java.lang.String ANSI_UL
           
static java.lang.String ANSI_W_ON_B
           
static java.lang.String ANSI_W_ON_R
           
static java.lang.String ANSI_WHITE
           
static java.lang.String ANSI_YELLOW
           
static java.lang.String ARRAY_CP
           
static int ARRAY_DURATION
           
static int ATOM_CA
           
static java.lang.String BASE64_CHARS
           
static int BG_NOT_EDITABLE
           
static java.lang.String BLUE_DEBUG
           
static double BUGFIX_OPENJDK_G2
           
static java.lang.String CLASS_Aligner3D
           
static java.lang.String CLASS_Aligner3D_Mapsci
           
static java.lang.String CLASS_Aligner3D_Matt
           
static java.lang.String CLASS_Aligner3D_Mustang
           
static java.lang.String CLASS_Aligner3D_Smolign
           
static java.lang.String CLASS_AlignmentEntropy
           
static java.lang.String CLASS_AlignmentScore
           
static java.lang.String CLASS_AlignmentWriterHSSP
           
static java.lang.String CLASS_Blaster_local_NCBI
           
static java.lang.String CLASS_Blaster_local_NCBI_gapped_PSI
           
static java.lang.String CLASS_Blaster_local_Wu
           
static java.lang.String CLASS_Blaster_SOAP_ebi
           
static java.lang.String CLASS_ChAstexPROXY
           
static java.lang.String CLASS_ChJmolPROXY
           
static java.lang.String CLASS_CoiledCoil_PredictorRobinson
           
static java.lang.String CLASS_ConsensusSequence
           
static java.lang.String CLASS_CountResidues
           
static java.lang.String CLASS_CrudeSequenceDisSimilarity
           
static java.lang.String CLASS_DemoAssociateObjectsToProteins
           
static java.lang.String CLASS_DesktopUtils
           
static java.lang.String CLASS_Dialog_bl2seq
           
static java.lang.String CLASS_Dialog3DViewer
           
static java.lang.String CLASS_DialogAlign
           
static java.lang.String CLASS_DialogAlignOneToAll
           
static java.lang.String CLASS_DialogBarChart
           
static java.lang.String CLASS_DialogBlast
           
static java.lang.String CLASS_DialogCompareProteins
           
static java.lang.String CLASS_DialogCopyAnnotations
           
static java.lang.String CLASS_DialogDifferentResidues
           
static java.lang.String CLASS_DialogDotPlot
           
static java.lang.String CLASS_DialogExportAlignment
           
static java.lang.String CLASS_DialogExportProteins
           
static java.lang.String CLASS_DialogExportWord
           
static java.lang.String CLASS_DialogFetchPdb
           
static java.lang.String CLASS_DialogFetchSRS
           
static java.lang.String CLASS_DialogGenbank
           
static java.lang.String CLASS_DialogHighlightPattern
           
static java.lang.String CLASS_DialogImportMFA
           
static java.lang.String CLASS_DialogInferCDS
           
static java.lang.String CLASS_DialogManyInOneRow
           
static java.lang.String CLASS_DialogNewProtein
           
static java.lang.String CLASS_DialogNonRedundantSequenceSet
           
static java.lang.String CLASS_DialogPhylogeneticTree
           
static java.lang.String CLASS_DialogPlot
           
static java.lang.String CLASS_DialogPredictCoiledCoil
           
static java.lang.String CLASS_DialogPredictSecondaryStructures
           
static java.lang.String CLASS_DialogPredictTmHelices2
           
static java.lang.String CLASS_DialogPredictTmHelicesMulti
           
static java.lang.String CLASS_DialogProteinList
           
static java.lang.String CLASS_DialogPublishAlignment
           
static java.lang.String CLASS_DialogRenameProteins
           
static java.lang.String CLASS_DialogResidueAnnotationChanges
           
static java.lang.String CLASS_DialogResidueAnnotationList
           
static java.lang.String CLASS_DialogRestoreFromBackup
           
static java.lang.String CLASS_DialogSelectionOfResidues
           
static java.lang.String CLASS_DialogSelectionOfResiduesMain
           
static java.lang.String CLASS_DialogSimilarStructure
           
static java.lang.String CLASS_DialogSortProteins
           
static java.lang.String CLASS_DialogSubcellularLocalization
           
static java.lang.String CLASS_DialogSuperimpose3D
           
static java.lang.String CLASS_Distance3DToCursor
           
static java.lang.String CLASS_Distance3DToHetero
           
static java.lang.String CLASS_DnaExonStart
           
static java.lang.String CLASS_EditDna
           
static java.lang.String CLASS_FlavinePROXY
           
static java.lang.String CLASS_Hydrophobicity
           
static java.lang.String CLASS_Hyperrefs
           
static java.lang.String CLASS_IndividualSequenceDisSimilarity
           
static java.lang.String CLASS_IntermediateSeq
           
static java.lang.String CLASS_MultipleAligner_SPEM
           
static java.lang.String CLASS_MultipleAlignerAlign_m
           
static java.lang.String CLASS_MultipleAlignerAmap
           
static java.lang.String CLASS_MultipleAlignerClustalW
           
static java.lang.String CLASS_MultipleAlignerDialign
           
static java.lang.String CLASS_MultipleAlignerDialignT
           
static java.lang.String CLASS_MultipleAlignerKalign
           
static java.lang.String CLASS_MultipleAlignerMafft
           
static java.lang.String CLASS_MultipleAlignerMuscle
           
static java.lang.String CLASS_MultipleAlignerProbcons2
           
static java.lang.String CLASS_MultipleAlignerT_Coffee
           
static java.lang.String CLASS_PairAlignerJAlignerPROXY
           
static java.lang.String CLASS_PairAlignerNeoBioPROXY
           
static java.lang.String CLASS_PhylogeneticTree_Archaeopteryx
           
static java.lang.String CLASS_PhylogeneticTree_TreeTop
           
static java.lang.String CLASS_Prione
           
static java.lang.String CLASS_Proteasome
           
static java.lang.String CLASS_Protein3d
           
static java.lang.String CLASS_ProteinsSorter_with3D_without3D
           
static java.lang.String CLASS_Pymol
           
static java.lang.String CLASS_ResidueAnnotationView
           
static java.lang.String CLASS_ResidueHydrophobicity_TOPPRED
           
static java.lang.String CLASS_ResidueSolventAccessibility
           
static java.lang.String CLASS_ResidueValues_from_textfile
           
static java.lang.String CLASS_SecondaryStructure_Jnet
           
static java.lang.String CLASS_SecondaryStructure_NNPREDICT
           
static java.lang.String CLASS_SecondaryStructure_Sopma
           
static java.lang.String CLASS_SequenceDisSimilarityAsAligned
           
static java.lang.String CLASS_SimilarPdb_blastEBI
           
static java.lang.String CLASS_StrapHotswap
           
static java.lang.String CLASS_Superimpose_CEPROXY
           
static java.lang.String CLASS_Superimpose_GangstaPlus
           
static java.lang.String CLASS_Superimpose_GoedePROXY
           
static java.lang.String CLASS_Superimpose_LajollaProteinPROXY
           
static java.lang.String CLASS_Superimpose_LajollaRNA
           
static java.lang.String CLASS_Superimpose_native_CE
           
static java.lang.String CLASS_Superimpose_TM_align
           
static java.lang.String CLASS_Texshade
           
static java.lang.String CLASS_TransmembraneHelix_DAS
           
static java.lang.String CLASS_TransmembraneHelix_HMMTOP
           
static java.lang.String CLASS_TransmembraneHelix_MEMSAT
           
static java.lang.String CLASS_TransmembraneHelix_ORIENTM
           
static java.lang.String CLASS_TransmembraneHelix_Phobius
           
static java.lang.String CLASS_TransmembraneHelix_PRED_TMR
           
static java.lang.String CLASS_TransmembraneHelix_SOSUI
           
static java.lang.String CLASS_TransmembraneHelix_SPLIT3
           
static java.lang.String CLASS_TransmembraneHelix_SPLIT4
           
static java.lang.String CLASS_TransmembraneHelix_THUMBUP
           
static java.lang.String CLASS_TransmembraneHelix_TMAP
           
static java.lang.String CLASS_TransmembraneHelix_TMAP_MULTI
           
static java.lang.String CLASS_TransmembraneHelix_TMHMM2
           
static java.lang.String CLASS_TransmembraneHelix_TMPRED
           
static java.lang.String CLASS_TransmembraneHelix_TOPPRED
           
static java.lang.String CLASS_TransmembraneHelix_WaveTM
           
static int CLOSE_ALLOWED
           
static int CLOSE_ASK
           
static int CLOSE_CHILDS
           
static int CLOSE_CtrlW
           
static int CLOSE_CtrlW_ESC
           
static int CLOSE_DISPOSE
           
static int CLOSE_DISPOSE_TABS
           
static int CLOSE_ESC
           
static int CLOSE_MASK
           
static int CLOSE_NO_REMOVE
           
static int CLOSE_RM_CHILDS
           
static java.lang.String CMD_CLEAR
           
static java.lang.String CMD_MENU_SELECTION_CHANGED
           
static java.lang.String CMD_MIDDLE_MOUSE_BUTTON
           
static int COLOR_REF
           
static int COLOR_REF_GRAY
           
static long COMPLETION_DIRECTORY_PATH
           
static long COMPLETION_FILES_IN_WORKING_DIR
           
static int DEFAULT_BACKGROUND
           
static int DEFAULT_BACKGROUND_D
           
static java.lang.String DIR_ANNOTATIONS
           
static java.lang.String DIR_GAPS
           
static int DISPOSE_CtrlW
           
static java.lang.String DO_NOT_ASK
           
static char DOCTYPE_HTML
           
static char DOCTYPE_JAVADOC
           
static char DOCTYPE_TUTORIAL
           
static int DURATION
           
static int EDT
           
static int EM
           
static long ENABLE_EVT_MASK
           
static int EX
           
static java.lang.String FEATURE_ACTIVE_SITE
           
static java.lang.String GREEN_DONE
           
static java.lang.String GREEN_SUCCESS
           
static int HETERO_CA
           
static int HETERO_CO
           
static int HETERO_D2O
           
static int HETERO_DDO
           
static int HETERO_DOD
           
static int HETERO_FE
           
static int HETERO_H2O
           
static int HETERO_HHO
           
static int HETERO_HOH
           
static int HETERO_MG
           
static int HETERO_MN
           
static int HETERO_NA
           
static int HETERO_NI
           
static int HETERO_NM
           
static int HETERO_ODD
           
static int HETERO_OHH
           
static int HETERO_SE
           
static int HETERO_ZN
           
static long HIGHLIGHT_DOT_MATCHES_ANY
           
static long HIGHLIGHT_IGNORE_CASE
           
static long HIGHLIGHT_IGNORE_LEN_OF_BLANK
           
static long HIGHLIGHT_NEVER_REMOVE
           
static long HIGHLIGHT_NOT_IN_SCROLLBAR
           
static long HIGHLIGHT_REMOVE_IF_TEXT_CHANGES
           
static long HIGHLIGHT_REPAINT
           
static long HIGHLIGHT_SKIP_BLANKS
           
static long HIGHLIGHT_STYLE_MASK
           
static long HIGHLIGHT_STYLE_RRECT
           
static long HIGHLIGHT_STYLE_UL
           
static long HIGHLIGHT_STYLE_WAVE
           
static long HIGHLIGHT_UPDATE_IF_TEXT_CHANGES
           
static long HIGHLIGHT_UPDATE_ON_MOUSE_ENTER
           
static java.lang.String IC_1
           
static java.lang.String IC_3D
           
static java.lang.String IC_ADD
           
static java.lang.String IC_ALIGN
           
static java.lang.String IC_ANNO
           
static java.lang.String IC_APPLY16
           
static java.lang.String IC_ATTACH
           
static java.lang.String IC_BATCH
           
static java.lang.String IC_BG_GLASS
           
static java.lang.String IC_BLANK
           
static java.lang.String IC_BUG
           
static java.lang.String IC_CAMERA
           
static java.lang.String IC_CLIPBOARD
           
static java.lang.String IC_CLOSE
           
static java.lang.String IC_COILEDCOIL
           
static java.lang.String IC_COLOR
           
static java.lang.String IC_COMPARE
           
static java.lang.String IC_COMPUTE
           
static java.lang.String IC_CONSOLE
           
static java.lang.String IC_CONTROLPANEL
           
static java.lang.String IC_COPY
           
static java.lang.String IC_crossed_through
           
static java.lang.String IC_CURSOR_HAND
           
static java.lang.String IC_CURSOR16
           
static java.lang.String IC_CUSTOM
           
static java.lang.String IC_CUSTOM24
           
static java.lang.String IC_CYGWIN
           
static java.lang.String IC_DIRECTORY
           
static java.lang.String IC_DNA
           
static java.lang.String IC_DND
           
static java.lang.String IC_DOTPLOT
           
static java.lang.String IC_DOWNLOAD
           
static java.lang.String IC_EDIT
           
static java.lang.String IC_EXPORT
           
static java.lang.String IC_FLAVIN
           
static java.lang.String IC_HAPPY
           
static java.lang.String IC_HELIX
           
static java.lang.String IC_HIDE
           
static java.lang.String IC_HOME
           
static java.lang.String IC_HOURGLASS
           
static java.lang.String IC_IMPORT
           
static java.lang.String IC_INFO
           
static java.lang.String IC_JAVA
           
static java.lang.String IC_JMOL
           
static java.lang.String IC_JV
           
static java.lang.String IC_KEYBOARD
           
static java.lang.String IC_KILL
           
static java.lang.String IC_MAC_FINDER
           
static java.lang.String IC_MAC_OS
           
static java.lang.String IC_MEASURE
           
static java.lang.String IC_MOVIE
           
static java.lang.String IC_NOTEPAD
           
static java.lang.String IC_ORIGINALCOORDINATES
           
static java.lang.String IC_PDF
           
static java.lang.String IC_PLOT
           
static java.lang.String IC_PLUGIN
           
static java.lang.String IC_PROTEASOME
           
static java.lang.String IC_PUBMED
           
static java.lang.String IC_PYMOL
           
static java.lang.String IC_RESCUE
           
static java.lang.String IC_SAVE_AS
           
static java.lang.String IC_SCISSOR
           
static java.lang.String IC_SEARCH
           
static java.lang.String IC_SHEET
           
static java.lang.String IC_SHOW
           
static java.lang.String IC_STOP
           
static java.lang.String IC_STRAP
           
static java.lang.String IC_STRUCTURE
           
static java.lang.String IC_STRUCTURE_BIG
           
static java.lang.String IC_SUPERIMPOSE
           
static java.lang.String IC_TM_HELIX
           
static java.lang.String IC_TO_END
           
static java.lang.String IC_TO_START
           
static java.lang.String IC_TOOLS
           
static java.lang.String IC_TRAFFICLIGHTGREEN
           
static java.lang.String IC_TRANSMEMBRANE
           
static java.lang.String IC_TREE
           
static java.lang.String IC_UMBRELLA
           
static java.lang.String IC_UNDERLINE
           
static java.lang.String IC_UNHAPPY
           
static java.lang.String IC_UNIPROT
           
static java.lang.String IC_UNSURE
           
static java.lang.String IC_WINDOWS
           
static java.lang.String IC_WINWORD
           
static java.lang.String IC_WORD
           
static java.lang.String IC_WWW
           
static java.lang.String IC_WWW_SETTINGS
           
static java.lang.String IC_WWW16
           
static java.lang.String IC_ZIP
           
static int ICON_HEIGHT
           
static java.lang.String IMAGE_CUSTOM_MAC_MOUSE
           
static int INT_NAN
           
static java.lang.String KEEP_DAYS_IN_CACHE
           
static java.lang.String KEY_ACCELERATOR
           
static java.lang.String KEY_ACTION_COMMAND
           
static java.lang.String KEY_AVOID_GARBAGE_COLLECT
           
static java.lang.String KEY_BACKGROUND
           
static java.lang.String KEY_CACHE_TEXT
           
static java.lang.String KEY_CLASS_NAME
           
static java.lang.String KEY_CLONED_FROM
           
static java.lang.String KEY_CLONES
           
static java.lang.String KEY_CLOSE_HOOKS
           
static java.lang.String KEY_CLOSE_OPT
           
static java.lang.String KEY_COLOR
           
static java.lang.String KEY_CONTEXT_OBJECTS
           
static java.lang.String KEY_CTRL_PNL
           
static java.lang.String KEY_DEPENDS_ON
           
static java.lang.String KEY_DRAG_SRC_ID
           
static java.lang.String KEY_DRAG_TARGET_DIRCTORY
           
static java.lang.String KEY_DROP_TARGET_REDIRECT
           
static java.lang.String KEY_EAST_PANEL
           
static java.lang.String KEY_EMAIL
           
static java.lang.String KEY_ENABLED
           
static java.lang.String KEY_ENABLED_IF_ENABLED
           
static java.lang.String KEY_FEHLER_1
           
static java.lang.String KEY_FEHLER_2
           
static java.lang.String KEY_FOREGROUND
           
static java.lang.String KEY_FRAME
           
static java.lang.String KEY_FRAME_TITLE
           
static java.lang.String KEY_GET_MENUBAR
           
static java.lang.String KEY_GET_VIEW
           
static java.lang.String KEY_HIDE_IF_EXEC_FORBIDDEN
           
static java.lang.String KEY_IF_EMPTY
           
static java.lang.String KEY_IGNORE_SELECTION_EVT
           
static java.lang.String KEY_IMAGE_FILE_NAME
           
static java.lang.String KEY_IS_PRINTING
           
static java.lang.String KEY_IS_RESIZING
           
static java.lang.String KEY_LOOKS_LIKE_DIVIDER
           
static java.lang.String KEY_MENU_ID
           
static java.lang.String KEY_MODEL
           
static java.lang.String KEY_MODI_COUNT
           
static java.lang.String KEY_NEEDS_REVALIDATE
           
static java.lang.String KEY_NO_PAINT_IF_ADJUSTING
           
static java.lang.String KEY_NORTH_PANEL
           
static java.lang.String KEY_NOT_YET_PAINTED
           
static java.lang.String KEY_OPTIONS
           
static java.lang.String KEY_OPTS_SCROLLPANE
           
static java.lang.String KEY_PANEL
           
static java.lang.String KEY_PREF_SIZE
           
static java.lang.String KEY_PRINTABLE_COMPONENTS
           
static java.lang.String KEY_PROGRESS
           
static java.lang.String KEY_RUN_AFTER
           
static java.lang.String KEY_SCALE_FACTOR
           
static java.lang.String KEY_SCROLL_EVEN_IF_INVISIBLE
           
static java.lang.String KEY_SCROLL_INCR_V
           
static java.lang.String KEY_SCROLL_TO_END
           
static java.lang.String KEY_SOUTH_PANEL
           
static java.lang.String KEY_TIP_LOCATION
           
static java.lang.String KEY_TITLE
           
static java.lang.String KEY_TOOLTIP
           
static java.lang.String KEY_VISIBLE_COMPONENT
           
static java.lang.String KEY_WEST_PANEL
           
static java.lang.String KOPT_ALREADY_PAINTED
           
static java.lang.String KOPT_COLOR_FROM_PARENT
           
static java.lang.String KOPT_CONTAINS_AA
           
static java.lang.String KOPT_CONTAINS_NT
           
static java.lang.String KOPT_DISABLE_EV
           
static java.lang.String KOPT_DISABLE_IF_CHILDS_DISABLED
           
static java.lang.String KOPT_DO_NOT_INVALIDATE
           
static java.lang.String KOPT_DRAGS_PARWINDOW
           
static java.lang.String KOPT_DRAW_UNDOCKABLE
           
static java.lang.String KOPT_HIDE_IF_DISABLED
           
static java.lang.String KOPT_IS_IN_TABLE_HEADER
           
static java.lang.String KOPT_IS_SELECTED
           
static java.lang.String KOPT_IS_VALIDATE_ROOT
           
static java.lang.String KOPT_NO_EVENT
           
static java.lang.String KOPT_NO_ICON
           
static java.lang.String KOPT_NOT_FOR_MENUBAR
           
static java.lang.String KOPT_NOT_INDICATE_TOO_SMALL
           
static java.lang.String KOPT_NOT_PAINTED_IF_DISABLED
           
static java.lang.String KOPT_SUPPORTS_CTRL_F
           
static java.lang.String KOPT_TRACKS_VIEWPORT_HEIGHT
           
static java.lang.String KOPT_TRACKS_VIEWPORT_WIDTH
           
static java.lang.String KOPT_UNDOCKABLE
           
static int LEN_PDB_ID
           
static int LEN_UNIPROT
           
static int LENGTH_PDBIDS
           
static java.lang.String LOG_SHOW
           
static double LOG10
           
static int MASK_KEYMODIFIERS
           
static int MAX_INT
           
static java.lang.String MAY_PROVIDE_TREE_VALUE
           
static int MIN_INT
           
static java.lang.String MOVIE_Context_Menu
           
static java.lang.String MOVIE_Drag_protein_to_3D
           
static java.lang.String MOVIE_Drag_to_another_STRAP
           
static java.lang.String MOVIE_Export_Proteins
           
static java.lang.String MOVIE_Load_Proteins
           
static java.lang.String MOVIE_Load_Proteins_web_pdb
           
static java.lang.String MOVIE_Load_Proteins_web_uniprot
           
static java.lang.String MOVIE_Sequence_Features_in_3D
           
static int NO_OPTION
           
static java.lang.String OPAQUE_FALSE
           
static java.lang.String OPAQUE_TRUE
           
static int PAUSE
           
static int PROTEIN_MIN_FILE_SZE
           
static java.lang.String PROVIDE_DND_FILES
           
static java.lang.String PROVIDE_FILES
           
static java.lang.String PROVIDE_HIGHLIGHTS
           
static java.lang.String PROVIDE_ID_FOR_JLIST
           
static java.lang.String PROVIDE_JORTHO_WORD_LIST
           
static java.lang.String PROVIDE_JPopupMenu
           
static java.lang.String PROVIDE_JTREE_CHILDS
           
static java.lang.String PROVIDE_JTREE_NODE_ID
           
static java.lang.String PROVIDE_TEXT_FOR_SORTING
           
static java.lang.String PROVIDE_WORD_COMPLETION_LIST
           
static java.lang.String PUBMED_CHARITE
           
static java.lang.String RED_CAUGHT_IN
           
static java.lang.String RED_ERROR
           
static java.lang.String RED_WARNING
           
static java.lang.String REGEX_NO_FILE_NAME
           
static java.lang.String REP_PARENT_WINDOW
           
static java.lang.String sATOM_TYPE_CA
           
static java.lang.String sATOM_TYPE_CB
           
static java.lang.String SPROGRESS
           
static java.lang.String STRAPOUT
           
static java.lang.String STRAPTMP
           
static int TF_HEIGHT
           
static java.lang.String TMP_DOWNLOAD_SFX
           
static java.lang.String TRASH
           
static long ULREFS_BG
           
static long ULREFS_DISABLE
           
static long ULREFS_DISABLE_UNTIL_MOUSE
           
static long ULREFS_GO
           
static long ULREFS_IF_NECESSARY
           
static long ULREFS_NO_ICON
           
static long ULREFS_NOT_CLICKABLE
           
static long ULREFS_PMID_DOWNLOAD
           
static long ULREFS_WEB_COLORS
           
static java.lang.String UNNAMED
           
static java.lang.String UPLOAD_DOC
           
static java.lang.String URL_METANNOGEN
           
static java.lang.String URL_RCSB_IMAGES
           
static java.lang.String URL_STRAP
           
static java.lang.String URL_STRAP_DATAFILES
           
static java.lang.String URL_STRAP_DOC
           
static java.lang.String URL_STRAP_JARS
           
static java.lang.String URL_STRAP_JNLP
           
static java.lang.String URL_STRAP_SRC
           
static java.lang.String WATCH_MOVIE
           
static int WHEN
           
static java.lang.String YELLOW_DEBUG
           
 
Method Summary
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Field Detail

LOG10

public static final double LOG10
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Constant Field Values

EM

public static final int EM
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Constant Field Values

EX

public static final int EX
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Constant Field Values

TF_HEIGHT

public static final int TF_HEIGHT
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Constant Field Values

LENGTH_PDBIDS

public static final int LENGTH_PDBIDS
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Constant Field Values

CLOSE_ALLOWED

public static final int CLOSE_ALLOWED
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Constant Field Values

CLOSE_DISPOSE

public static final int CLOSE_DISPOSE
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Constant Field Values

CLOSE_CtrlW

public static final int CLOSE_CtrlW
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Constant Field Values

CLOSE_ESC

public static final int CLOSE_ESC
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Constant Field Values

CLOSE_RM_CHILDS

public static final int CLOSE_RM_CHILDS
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Constant Field Values

CLOSE_CHILDS

public static final int CLOSE_CHILDS
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Constant Field Values

CLOSE_ASK

public static final int CLOSE_ASK
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Constant Field Values

CLOSE_NO_REMOVE

public static final int CLOSE_NO_REMOVE
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Constant Field Values

CLOSE_DISPOSE_TABS

public static final int CLOSE_DISPOSE_TABS
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Constant Field Values

CLOSE_MASK

public static final int CLOSE_MASK
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Constant Field Values

CLOSE_CtrlW_ESC

public static final int CLOSE_CtrlW_ESC
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Constant Field Values

DISPOSE_CtrlW

public static final int DISPOSE_CtrlW
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Constant Field Values

INT_NAN

public static final int INT_NAN
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Constant Field Values

NO_OPTION

public static final int NO_OPTION
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Constant Field Values

MAX_INT

public static final int MAX_INT
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Constant Field Values

MIN_INT

public static final int MIN_INT
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Constant Field Values

DEFAULT_BACKGROUND

public static final int DEFAULT_BACKGROUND
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Constant Field Values

BG_NOT_EDITABLE

public static final int BG_NOT_EDITABLE
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Constant Field Values

DEFAULT_BACKGROUND_D

public static final int DEFAULT_BACKGROUND_D
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Constant Field Values

COLOR_REF_GRAY

public static final int COLOR_REF_GRAY
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Constant Field Values

COLOR_REF

public static final int COLOR_REF
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Constant Field Values

MASK_KEYMODIFIERS

public static final int MASK_KEYMODIFIERS
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Constant Field Values

ICON_HEIGHT

public static final int ICON_HEIGHT
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Constant Field Values

REGEX_NO_FILE_NAME

public static final java.lang.String REGEX_NO_FILE_NAME
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Constant Field Values

BASE64_CHARS

public static final java.lang.String BASE64_CHARS
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Constant Field Values

REP_PARENT_WINDOW

public static final java.lang.String REP_PARENT_WINDOW
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Constant Field Values

SPROGRESS

public static final java.lang.String SPROGRESS
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Constant Field Values

WATCH_MOVIE

public static final java.lang.String WATCH_MOVIE
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Constant Field Values

MOVIE_Drag_to_another_STRAP

public static final java.lang.String MOVIE_Drag_to_another_STRAP
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Constant Field Values

MOVIE_Load_Proteins

public static final java.lang.String MOVIE_Load_Proteins
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Constant Field Values

MOVIE_Load_Proteins_web_uniprot

public static final java.lang.String MOVIE_Load_Proteins_web_uniprot
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Constant Field Values

MOVIE_Load_Proteins_web_pdb

public static final java.lang.String MOVIE_Load_Proteins_web_pdb
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Constant Field Values

MOVIE_Export_Proteins

public static final java.lang.String MOVIE_Export_Proteins
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Constant Field Values

MOVIE_Sequence_Features_in_3D

public static final java.lang.String MOVIE_Sequence_Features_in_3D
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Constant Field Values

MOVIE_Context_Menu

public static final java.lang.String MOVIE_Context_Menu
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Constant Field Values

MOVIE_Drag_protein_to_3D

public static final java.lang.String MOVIE_Drag_protein_to_3D
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Constant Field Values

IMAGE_CUSTOM_MAC_MOUSE

public static final java.lang.String IMAGE_CUSTOM_MAC_MOUSE
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Constant Field Values

LOG_SHOW

public static final java.lang.String LOG_SHOW
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Constant Field Values

IC_INFO

public static final java.lang.String IC_INFO
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Constant Field Values

IC_1

public static final java.lang.String IC_1
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Constant Field Values

IC_ATTACH

public static final java.lang.String IC_ATTACH
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Constant Field Values

IC_CLIPBOARD

public static final java.lang.String IC_CLIPBOARD
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Constant Field Values

IC_UNDERLINE

public static final java.lang.String IC_UNDERLINE
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Constant Field Values

IC_COPY

public static final java.lang.String IC_COPY
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Constant Field Values

IC_APPLY16

public static final java.lang.String IC_APPLY16
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Constant Field Values

IC_crossed_through

public static final java.lang.String IC_crossed_through
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Constant Field Values

IC_ALIGN

public static final java.lang.String IC_ALIGN
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Constant Field Values

IC_WINWORD

public static final java.lang.String IC_WINWORD
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Constant Field Values

IC_ANNO

public static final java.lang.String IC_ANNO
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Constant Field Values

IC_BATCH

public static final java.lang.String IC_BATCH
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Constant Field Values

IC_COMPUTE

public static final java.lang.String IC_COMPUTE
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Constant Field Values

IC_BG_GLASS

public static final java.lang.String IC_BG_GLASS
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Constant Field Values

IC_BLANK

public static final java.lang.String IC_BLANK
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Constant Field Values

IC_CAMERA

public static final java.lang.String IC_CAMERA
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Constant Field Values

IC_COMPARE

public static final java.lang.String IC_COMPARE
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Constant Field Values

IC_KEYBOARD

public static final java.lang.String IC_KEYBOARD
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Constant Field Values

IC_CLOSE

public static final java.lang.String IC_CLOSE
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Constant Field Values

IC_COILEDCOIL

public static final java.lang.String IC_COILEDCOIL
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Constant Field Values

IC_COLOR

public static final java.lang.String IC_COLOR
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Constant Field Values

IC_CURSOR16

public static final java.lang.String IC_CURSOR16
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Constant Field Values

IC_CURSOR_HAND

public static final java.lang.String IC_CURSOR_HAND
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Constant Field Values

IC_DND

public static final java.lang.String IC_DND
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Constant Field Values

IC_CONTROLPANEL

public static final java.lang.String IC_CONTROLPANEL
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Constant Field Values

IC_IMPORT

public static final java.lang.String IC_IMPORT
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Constant Field Values

IC_CUSTOM24

public static final java.lang.String IC_CUSTOM24
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Constant Field Values

IC_CUSTOM

public static final java.lang.String IC_CUSTOM
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Constant Field Values

IC_TOOLS

public static final java.lang.String IC_TOOLS
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Constant Field Values

IC_CYGWIN

public static final java.lang.String IC_CYGWIN
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Constant Field Values

IC_MOVIE

public static final java.lang.String IC_MOVIE
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Constant Field Values

IC_TM_HELIX

public static final java.lang.String IC_TM_HELIX
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Constant Field Values

IC_DIRECTORY

public static final java.lang.String IC_DIRECTORY
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Constant Field Values

IC_CONSOLE

public static final java.lang.String IC_CONSOLE
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Constant Field Values

IC_DNA

public static final java.lang.String IC_DNA
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Constant Field Values

IC_EDIT

public static final java.lang.String IC_EDIT
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Constant Field Values

IC_WWW16

public static final java.lang.String IC_WWW16
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Constant Field Values

IC_WWW

public static final java.lang.String IC_WWW
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Constant Field Values

IC_WORD

public static final java.lang.String IC_WORD
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Constant Field Values

IC_FLAVIN

public static final java.lang.String IC_FLAVIN
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Constant Field Values

IC_NOTEPAD

public static final java.lang.String IC_NOTEPAD
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Constant Field Values

IC_HAPPY

public static final java.lang.String IC_HAPPY
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Constant Field Values

IC_UNHAPPY

public static final java.lang.String IC_UNHAPPY
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Constant Field Values

IC_UNSURE

public static final java.lang.String IC_UNSURE
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Constant Field Values

IC_HELIX

public static final java.lang.String IC_HELIX
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Constant Field Values

IC_SHEET

public static final java.lang.String IC_SHEET
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Constant Field Values

IC_SHOW

public static final java.lang.String IC_SHOW
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Constant Field Values

IC_HIDE

public static final java.lang.String IC_HIDE
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Constant Field Values

IC_RESCUE

public static final java.lang.String IC_RESCUE
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Constant Field Values

IC_HOURGLASS

public static final java.lang.String IC_HOURGLASS
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Constant Field Values

IC_ADD

public static final java.lang.String IC_ADD
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Constant Field Values

IC_JAVA

public static final java.lang.String IC_JAVA
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Constant Field Values

IC_JMOL

public static final java.lang.String IC_JMOL
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Constant Field Values

IC_PROTEASOME

public static final java.lang.String IC_PROTEASOME
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Constant Field Values

IC_KILL

public static final java.lang.String IC_KILL
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Constant Field Values

IC_SAVE_AS

public static final java.lang.String IC_SAVE_AS
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Constant Field Values

IC_BUG

public static final java.lang.String IC_BUG
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Constant Field Values

IC_MAC_FINDER

public static final java.lang.String IC_MAC_FINDER
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Constant Field Values

IC_DOWNLOAD

public static final java.lang.String IC_DOWNLOAD
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Constant Field Values

IC_HOME

public static final java.lang.String IC_HOME
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Constant Field Values

IC_ORIGINALCOORDINATES

public static final java.lang.String IC_ORIGINALCOORDINATES
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Constant Field Values

IC_PDF

public static final java.lang.String IC_PDF
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Constant Field Values

IC_PLOT

public static final java.lang.String IC_PLOT
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Constant Field Values

IC_PUBMED

public static final java.lang.String IC_PUBMED
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Constant Field Values

IC_UNIPROT

public static final java.lang.String IC_UNIPROT
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Constant Field Values

IC_PLUGIN

public static final java.lang.String IC_PLUGIN
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Constant Field Values

IC_PYMOL

public static final java.lang.String IC_PYMOL
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Constant Field Values

IC_3D

public static final java.lang.String IC_3D
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Constant Field Values

IC_JV

public static final java.lang.String IC_JV
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Constant Field Values

IC_ZIP

public static final java.lang.String IC_ZIP
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Constant Field Values

IC_EXPORT

public static final java.lang.String IC_EXPORT
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Constant Field Values

IC_SCISSOR

public static final java.lang.String IC_SCISSOR
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Constant Field Values

IC_SEARCH

public static final java.lang.String IC_SEARCH
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Constant Field Values

IC_TO_END

public static final java.lang.String IC_TO_END
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Constant Field Values

IC_TO_START

public static final java.lang.String IC_TO_START
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Constant Field Values

IC_STOP

public static final java.lang.String IC_STOP
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Constant Field Values

IC_STRUCTURE

public static final java.lang.String IC_STRUCTURE
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Constant Field Values

IC_STRUCTURE_BIG

public static final java.lang.String IC_STRUCTURE_BIG
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Constant Field Values

IC_SUPERIMPOSE

public static final java.lang.String IC_SUPERIMPOSE
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Constant Field Values

IC_STRAP

public static final java.lang.String IC_STRAP
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Constant Field Values

IC_DOTPLOT

public static final java.lang.String IC_DOTPLOT
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Constant Field Values

IC_TRAFFICLIGHTGREEN

public static final java.lang.String IC_TRAFFICLIGHTGREEN
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Constant Field Values

IC_TRANSMEMBRANE

public static final java.lang.String IC_TRANSMEMBRANE
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Constant Field Values

IC_TREE

public static final java.lang.String IC_TREE
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Constant Field Values

IC_UMBRELLA

public static final java.lang.String IC_UMBRELLA
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Constant Field Values

IC_WWW_SETTINGS

public static final java.lang.String IC_WWW_SETTINGS
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Constant Field Values

IC_MEASURE

public static final java.lang.String IC_MEASURE
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Constant Field Values

IC_MAC_OS

public static final java.lang.String IC_MAC_OS
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Constant Field Values

IC_WINDOWS

public static final java.lang.String IC_WINDOWS
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Constant Field Values

ANSI_UL

public static final java.lang.String ANSI_UL
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Constant Field Values

ANSI_BOLD

public static final java.lang.String ANSI_BOLD
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Constant Field Values

ANSI_RESET

public static final java.lang.String ANSI_RESET
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Constant Field Values

ANSI_FG_BLACK

public static final java.lang.String ANSI_FG_BLACK
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Constant Field Values

ANSI_FG_RED

public static final java.lang.String ANSI_FG_RED
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Constant Field Values

ANSI_FG_GREEN

public static final java.lang.String ANSI_FG_GREEN
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Constant Field Values

ANSI_FG_YELLOW

public static final java.lang.String ANSI_FG_YELLOW
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Constant Field Values

ANSI_FG_BLUE

public static final java.lang.String ANSI_FG_BLUE
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Constant Field Values

ANSI_FG_MAGENTA

public static final java.lang.String ANSI_FG_MAGENTA
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Constant Field Values

ANSI_FG_CYAN

public static final java.lang.String ANSI_FG_CYAN
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Constant Field Values

ANSI_FG_WHITE

public static final java.lang.String ANSI_FG_WHITE
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Constant Field Values

ANSI_BLACK

public static final java.lang.String ANSI_BLACK
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Constant Field Values

ANSI_RED

public static final java.lang.String ANSI_RED
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Constant Field Values

ANSI_GREEN

public static final java.lang.String ANSI_GREEN
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Constant Field Values

ANSI_YELLOW

public static final java.lang.String ANSI_YELLOW
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Constant Field Values

ANSI_BLUE

public static final java.lang.String ANSI_BLUE
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Constant Field Values

ANSI_MAGENTA

public static final java.lang.String ANSI_MAGENTA
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Constant Field Values

ANSI_CYAN

public static final java.lang.String ANSI_CYAN
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Constant Field Values

ANSI_WHITE

public static final java.lang.String ANSI_WHITE
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Constant Field Values

ANSI_TERMINAL

public static final java.lang.String ANSI_TERMINAL
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Constant Field Values

YELLOW_DEBUG

public static final java.lang.String YELLOW_DEBUG
See Also:
Constant Field Values

BLUE_DEBUG

public static final java.lang.String BLUE_DEBUG
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Constant Field Values

RED_ERROR

public static final java.lang.String RED_ERROR
See Also:
Constant Field Values

RED_WARNING

public static final java.lang.String RED_WARNING
See Also:
Constant Field Values

RED_CAUGHT_IN

public static final java.lang.String RED_CAUGHT_IN
See Also:
Constant Field Values

GREEN_SUCCESS

public static final java.lang.String GREEN_SUCCESS
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Constant Field Values

GREEN_DONE

public static final java.lang.String GREEN_DONE
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Constant Field Values

ANSI_W_ON_B

public static final java.lang.String ANSI_W_ON_B
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Constant Field Values

ANSI_W_ON_R

public static final java.lang.String ANSI_W_ON_R
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Constant Field Values

DIR_GAPS

public static final java.lang.String DIR_GAPS
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Constant Field Values

DIR_ANNOTATIONS

public static final java.lang.String DIR_ANNOTATIONS
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Constant Field Values

sATOM_TYPE_CA

public static final java.lang.String sATOM_TYPE_CA
See Also:
Constant Field Values

sATOM_TYPE_CB

public static final java.lang.String sATOM_TYPE_CB
See Also:
Constant Field Values

STRAPOUT

public static final java.lang.String STRAPOUT
See Also:
Constant Field Values

STRAPTMP

public static final java.lang.String STRAPTMP
See Also:
Constant Field Values

TRASH

public static final java.lang.String TRASH
See Also:
Constant Field Values

_CC

public static final java.lang.String _CC
See Also:
Constant Field Values

_CCP

public static final java.lang.String _CCP
See Also:
Constant Field Values

_CCS

public static final java.lang.String _CCS
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Constant Field Values

_CCM

public static final java.lang.String _CCM
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Constant Field Values

_CCB

public static final java.lang.String _CCB
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Constant Field Values

_CCSSC

public static final java.lang.String _CCSSC
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Constant Field Values

_CCSE

public static final java.lang.String _CCSE
See Also:
Constant Field Values

CLASS_Pymol

public static final java.lang.String CLASS_Pymol
See Also:
Constant Field Values

CLASS_Protein3d

public static final java.lang.String CLASS_Protein3d
See Also:
Constant Field Values

CLASS_ChJmolPROXY

public static final java.lang.String CLASS_ChJmolPROXY
See Also:
Constant Field Values

CLASS_ChAstexPROXY

public static final java.lang.String CLASS_ChAstexPROXY
See Also:
Constant Field Values

CLASS_DialogSubcellularLocalization

public static final java.lang.String CLASS_DialogSubcellularLocalization
See Also:
Constant Field Values

CLASS_DialogSimilarStructure

public static final java.lang.String CLASS_DialogSimilarStructure
See Also:
Constant Field Values

CLASS_FlavinePROXY

public static final java.lang.String CLASS_FlavinePROXY
See Also:
Constant Field Values

CLASS_MultipleAlignerKalign

public static final java.lang.String CLASS_MultipleAlignerKalign
See Also:
Constant Field Values

CLASS_Dialog3DViewer

public static final java.lang.String CLASS_Dialog3DViewer
See Also:
Constant Field Values

CLASS_DialogNewProtein

public static final java.lang.String CLASS_DialogNewProtein
See Also:
Constant Field Values

CLASS_DialogAlignOneToAll

public static final java.lang.String CLASS_DialogAlignOneToAll
See Also:
Constant Field Values

CLASS_DialogAlign

public static final java.lang.String CLASS_DialogAlign
See Also:
Constant Field Values

CLASS_DialogPhylogeneticTree

public static final java.lang.String CLASS_DialogPhylogeneticTree
See Also:
Constant Field Values

CLASS_DialogBarChart

public static final java.lang.String CLASS_DialogBarChart
See Also:
Constant Field Values

CLASS_DialogCompareProteins

public static final java.lang.String CLASS_DialogCompareProteins
See Also:
Constant Field Values

CLASS_DialogDifferentResidues

public static final java.lang.String CLASS_DialogDifferentResidues
See Also:
Constant Field Values

CLASS_DialogDotPlot

public static final java.lang.String CLASS_DialogDotPlot
See Also:
Constant Field Values

CLASS_DialogExportAlignment

public static final java.lang.String CLASS_DialogExportAlignment
See Also:
Constant Field Values

CLASS_DialogExportProteins

public static final java.lang.String CLASS_DialogExportProteins
See Also:
Constant Field Values

CLASS_DialogExportWord

public static final java.lang.String CLASS_DialogExportWord
See Also:
Constant Field Values

CLASS_DialogFetchPdb

public static final java.lang.String CLASS_DialogFetchPdb
See Also:
Constant Field Values

CLASS_DialogFetchSRS

public static final java.lang.String CLASS_DialogFetchSRS
See Also:
Constant Field Values

CLASS_DialogGenbank

public static final java.lang.String CLASS_DialogGenbank
See Also:
Constant Field Values

CLASS_DialogHighlightPattern

public static final java.lang.String CLASS_DialogHighlightPattern
See Also:
Constant Field Values

CLASS_DialogImportMFA

public static final java.lang.String CLASS_DialogImportMFA
See Also:
Constant Field Values

CLASS_DialogManyInOneRow

public static final java.lang.String CLASS_DialogManyInOneRow
See Also:
Constant Field Values

CLASS_DialogPlot

public static final java.lang.String CLASS_DialogPlot
See Also:
Constant Field Values

CLASS_DialogPredictSecondaryStructures

public static final java.lang.String CLASS_DialogPredictSecondaryStructures
See Also:
Constant Field Values

CLASS_DialogPredictCoiledCoil

public static final java.lang.String CLASS_DialogPredictCoiledCoil
See Also:
Constant Field Values

CLASS_DialogPredictTmHelices2

public static final java.lang.String CLASS_DialogPredictTmHelices2
See Also:
Constant Field Values

CLASS_DialogProteinList

public static final java.lang.String CLASS_DialogProteinList
See Also:
Constant Field Values

CLASS_DialogRenameProteins

public static final java.lang.String CLASS_DialogRenameProteins
See Also:
Constant Field Values

CLASS_DialogRestoreFromBackup

public static final java.lang.String CLASS_DialogRestoreFromBackup
See Also:
Constant Field Values

CLASS_DialogSelectionOfResidues

public static final java.lang.String CLASS_DialogSelectionOfResidues
See Also:
Constant Field Values

CLASS_DialogSelectionOfResiduesMain

public static final java.lang.String CLASS_DialogSelectionOfResiduesMain
See Also:
Constant Field Values

CLASS_DialogSortProteins

public static final java.lang.String CLASS_DialogSortProteins
See Also:
Constant Field Values

CLASS_DialogSuperimpose3D

public static final java.lang.String CLASS_DialogSuperimpose3D
See Also:
Constant Field Values

CLASS_Superimpose_LajollaProteinPROXY

public static final java.lang.String CLASS_Superimpose_LajollaProteinPROXY
See Also:
Constant Field Values

CLASS_Superimpose_CEPROXY

public static final java.lang.String CLASS_Superimpose_CEPROXY
See Also:
Constant Field Values

CLASS_Superimpose_LajollaRNA

public static final java.lang.String CLASS_Superimpose_LajollaRNA
See Also:
Constant Field Values

CLASS_DialogBlast

public static final java.lang.String CLASS_DialogBlast
See Also:
Constant Field Values

CLASS_IntermediateSeq

public static final java.lang.String CLASS_IntermediateSeq
See Also:
Constant Field Values

CLASS_Dialog_bl2seq

public static final java.lang.String CLASS_Dialog_bl2seq
See Also:
Constant Field Values

CLASS_DialogInferCDS

public static final java.lang.String CLASS_DialogInferCDS
See Also:
Constant Field Values

CLASS_DialogPredictTmHelicesMulti

public static final java.lang.String CLASS_DialogPredictTmHelicesMulti
See Also:
Constant Field Values

CLASS_DnaExonStart

public static final java.lang.String CLASS_DnaExonStart
See Also:
Constant Field Values

CLASS_EditDna

public static final java.lang.String CLASS_EditDna
See Also:
Constant Field Values

CLASS_Prione

public static final java.lang.String CLASS_Prione
See Also:
Constant Field Values

CLASS_Proteasome

public static final java.lang.String CLASS_Proteasome
See Also:
Constant Field Values

CLASS_Texshade

public static final java.lang.String CLASS_Texshade
See Also:
Constant Field Values

CLASS_ResidueAnnotationView

public static final java.lang.String CLASS_ResidueAnnotationView
See Also:
Constant Field Values

CLASS_DialogResidueAnnotationChanges

public static final java.lang.String CLASS_DialogResidueAnnotationChanges
See Also:
Constant Field Values

CLASS_DialogCopyAnnotations

public static final java.lang.String CLASS_DialogCopyAnnotations
See Also:
Constant Field Values

CLASS_DialogResidueAnnotationList

public static final java.lang.String CLASS_DialogResidueAnnotationList
See Also:
Constant Field Values

CLASS_DialogNonRedundantSequenceSet

public static final java.lang.String CLASS_DialogNonRedundantSequenceSet
See Also:
Constant Field Values

CLASS_Hyperrefs

public static final java.lang.String CLASS_Hyperrefs
See Also:
Constant Field Values

CLASS_DesktopUtils

public static final java.lang.String CLASS_DesktopUtils
See Also:
Constant Field Values

CLASS_StrapHotswap

public static final java.lang.String CLASS_StrapHotswap
See Also:
Constant Field Values

CLASS_CrudeSequenceDisSimilarity

public static final java.lang.String CLASS_CrudeSequenceDisSimilarity
See Also:
Constant Field Values

CLASS_AlignmentWriterHSSP

public static final java.lang.String CLASS_AlignmentWriterHSSP
See Also:
Constant Field Values

CLASS_ConsensusSequence

public static final java.lang.String CLASS_ConsensusSequence
See Also:
Constant Field Values

CLASS_DemoAssociateObjectsToProteins

public static final java.lang.String CLASS_DemoAssociateObjectsToProteins
See Also:
Constant Field Values

CLASS_Distance3DToHetero

public static final java.lang.String CLASS_Distance3DToHetero
See Also:
Constant Field Values

CLASS_Distance3DToCursor

public static final java.lang.String CLASS_Distance3DToCursor
See Also:
Constant Field Values

CLASS_SequenceDisSimilarityAsAligned

public static final java.lang.String CLASS_SequenceDisSimilarityAsAligned
See Also:
Constant Field Values

CLASS_AlignmentScore

public static final java.lang.String CLASS_AlignmentScore
See Also:
Constant Field Values

CLASS_IndividualSequenceDisSimilarity

public static final java.lang.String CLASS_IndividualSequenceDisSimilarity
See Also:
Constant Field Values

CLASS_AlignmentEntropy

public static final java.lang.String CLASS_AlignmentEntropy
See Also:
Constant Field Values

CLASS_ResidueHydrophobicity_TOPPRED

public static final java.lang.String CLASS_ResidueHydrophobicity_TOPPRED
See Also:
Constant Field Values

CLASS_ResidueValues_from_textfile

public static final java.lang.String CLASS_ResidueValues_from_textfile
See Also:
Constant Field Values

CLASS_ResidueSolventAccessibility

public static final java.lang.String CLASS_ResidueSolventAccessibility
See Also:
Constant Field Values

CLASS_Hydrophobicity

public static final java.lang.String CLASS_Hydrophobicity
See Also:
Constant Field Values

CLASS_CountResidues

public static final java.lang.String CLASS_CountResidues
See Also:
Constant Field Values

CLASS_MultipleAlignerClustalW

public static final java.lang.String CLASS_MultipleAlignerClustalW
See Also:
Constant Field Values

CLASS_Aligner3D

public static final java.lang.String CLASS_Aligner3D
See Also:
Constant Field Values

CLASS_MultipleAlignerAmap

public static final java.lang.String CLASS_MultipleAlignerAmap
See Also:
Constant Field Values

CLASS_MultipleAlignerMafft

public static final java.lang.String CLASS_MultipleAlignerMafft
See Also:
Constant Field Values

CLASS_MultipleAlignerT_Coffee

public static final java.lang.String CLASS_MultipleAlignerT_Coffee
See Also:
Constant Field Values

CLASS_MultipleAlignerMuscle

public static final java.lang.String CLASS_MultipleAlignerMuscle
See Also:
Constant Field Values

CLASS_MultipleAlignerAlign_m

public static final java.lang.String CLASS_MultipleAlignerAlign_m
See Also:
Constant Field Values

CLASS_MultipleAlignerDialign

public static final java.lang.String CLASS_MultipleAlignerDialign
See Also:
Constant Field Values

CLASS_MultipleAlignerDialignT

public static final java.lang.String CLASS_MultipleAlignerDialignT
See Also:
Constant Field Values

CLASS_MultipleAlignerProbcons2

public static final java.lang.String CLASS_MultipleAlignerProbcons2
See Also:
Constant Field Values

CLASS_MultipleAligner_SPEM

public static final java.lang.String CLASS_MultipleAligner_SPEM
See Also:
Constant Field Values

CLASS_PairAlignerNeoBioPROXY

public static final java.lang.String CLASS_PairAlignerNeoBioPROXY
See Also:
Constant Field Values

CLASS_PairAlignerJAlignerPROXY

public static final java.lang.String CLASS_PairAlignerJAlignerPROXY
See Also:
Constant Field Values

CLASS_ProteinsSorter_with3D_without3D

public static final java.lang.String CLASS_ProteinsSorter_with3D_without3D
See Also:
Constant Field Values

CLASS_Superimpose_native_CE

public static final java.lang.String CLASS_Superimpose_native_CE
See Also:
Constant Field Values

CLASS_Superimpose_GangstaPlus

public static final java.lang.String CLASS_Superimpose_GangstaPlus
See Also:
Constant Field Values

CLASS_Superimpose_GoedePROXY

public static final java.lang.String CLASS_Superimpose_GoedePROXY
See Also:
Constant Field Values

CLASS_Superimpose_TM_align

public static final java.lang.String CLASS_Superimpose_TM_align
See Also:
Constant Field Values

CLASS_Aligner3D_Mapsci

public static final java.lang.String CLASS_Aligner3D_Mapsci
See Also:
Constant Field Values

CLASS_Aligner3D_Mustang

public static final java.lang.String CLASS_Aligner3D_Mustang
See Also:
Constant Field Values

CLASS_Aligner3D_Smolign

public static final java.lang.String CLASS_Aligner3D_Smolign
See Also:
Constant Field Values

CLASS_Aligner3D_Matt

public static final java.lang.String CLASS_Aligner3D_Matt
See Also:
Constant Field Values

CLASS_TransmembraneHelix_HMMTOP

public static final java.lang.String CLASS_TransmembraneHelix_HMMTOP
See Also:
Constant Field Values

CLASS_TransmembraneHelix_Phobius

public static final java.lang.String CLASS_TransmembraneHelix_Phobius
See Also:
Constant Field Values

CLASS_DialogPublishAlignment

public static final java.lang.String CLASS_DialogPublishAlignment
See Also:
Constant Field Values

CLASS_TransmembraneHelix_TOPPRED

public static final java.lang.String CLASS_TransmembraneHelix_TOPPRED
See Also:
Constant Field Values

CLASS_TransmembraneHelix_ORIENTM

public static final java.lang.String CLASS_TransmembraneHelix_ORIENTM
See Also:
Constant Field Values

CLASS_TransmembraneHelix_SPLIT4

public static final java.lang.String CLASS_TransmembraneHelix_SPLIT4
See Also:
Constant Field Values

CLASS_TransmembraneHelix_SPLIT3

public static final java.lang.String CLASS_TransmembraneHelix_SPLIT3
See Also:
Constant Field Values

CLASS_TransmembraneHelix_SOSUI

public static final java.lang.String CLASS_TransmembraneHelix_SOSUI
See Also:
Constant Field Values

CLASS_TransmembraneHelix_DAS

public static final java.lang.String CLASS_TransmembraneHelix_DAS
See Also:
Constant Field Values

CLASS_TransmembraneHelix_PRED_TMR

public static final java.lang.String CLASS_TransmembraneHelix_PRED_TMR
See Also:
Constant Field Values

CLASS_TransmembraneHelix_TMHMM2

public static final java.lang.String CLASS_TransmembraneHelix_TMHMM2
See Also:
Constant Field Values

CLASS_TransmembraneHelix_TMAP

public static final java.lang.String CLASS_TransmembraneHelix_TMAP
See Also:
Constant Field Values

CLASS_TransmembraneHelix_TMPRED

public static final java.lang.String CLASS_TransmembraneHelix_TMPRED
See Also:
Constant Field Values

CLASS_TransmembraneHelix_MEMSAT

public static final java.lang.String CLASS_TransmembraneHelix_MEMSAT
See Also:
Constant Field Values

CLASS_TransmembraneHelix_WaveTM

public static final java.lang.String CLASS_TransmembraneHelix_WaveTM
See Also:
Constant Field Values

CLASS_TransmembraneHelix_THUMBUP

public static final java.lang.String CLASS_TransmembraneHelix_THUMBUP
See Also:
Constant Field Values

CLASS_TransmembraneHelix_TMAP_MULTI

public static final java.lang.String CLASS_TransmembraneHelix_TMAP_MULTI
See Also:
Constant Field Values

CLASS_SecondaryStructure_NNPREDICT

public static final java.lang.String CLASS_SecondaryStructure_NNPREDICT
See Also:
Constant Field Values

CLASS_SecondaryStructure_Sopma

public static final java.lang.String CLASS_SecondaryStructure_Sopma
See Also:
Constant Field Values

CLASS_SecondaryStructure_Jnet

public static final java.lang.String CLASS_SecondaryStructure_Jnet
See Also:
Constant Field Values

CLASS_CoiledCoil_PredictorRobinson

public static final java.lang.String CLASS_CoiledCoil_PredictorRobinson
See Also:
Constant Field Values

CLASS_Blaster_SOAP_ebi

public static final java.lang.String CLASS_Blaster_SOAP_ebi
See Also:
Constant Field Values

CLASS_Blaster_local_Wu

public static final java.lang.String CLASS_Blaster_local_Wu
See Also:
Constant Field Values

CLASS_Blaster_local_NCBI

public static final java.lang.String CLASS_Blaster_local_NCBI
See Also:
Constant Field Values

CLASS_SimilarPdb_blastEBI

public static final java.lang.String CLASS_SimilarPdb_blastEBI
See Also:
Constant Field Values

CLASS_Blaster_local_NCBI_gapped_PSI

public static final java.lang.String CLASS_Blaster_local_NCBI_gapped_PSI
See Also:
Constant Field Values

CLASS_PhylogeneticTree_TreeTop

public static final java.lang.String CLASS_PhylogeneticTree_TreeTop
See Also:
Constant Field Values

CLASS_PhylogeneticTree_Archaeopteryx

public static final java.lang.String CLASS_PhylogeneticTree_Archaeopteryx
See Also:
Constant Field Values

URL_STRAP

public static final java.lang.String URL_STRAP
See Also:
Constant Field Values

URL_STRAP_JNLP

public static final java.lang.String URL_STRAP_JNLP
See Also:
Constant Field Values

URL_STRAP_DOC

public static final java.lang.String URL_STRAP_DOC
See Also:
Constant Field Values

URL_METANNOGEN

public static final java.lang.String URL_METANNOGEN
See Also:
Constant Field Values

URL_STRAP_JARS

public static final java.lang.String URL_STRAP_JARS
See Also:
Constant Field Values

URL_STRAP_DATAFILES

public static final java.lang.String URL_STRAP_DATAFILES
See Also:
Constant Field Values

URL_STRAP_SRC

public static final java.lang.String URL_STRAP_SRC
See Also:
Constant Field Values

URL_RCSB_IMAGES

public static final java.lang.String URL_RCSB_IMAGES
See Also:
Constant Field Values

TMP_DOWNLOAD_SFX

public static final java.lang.String TMP_DOWNLOAD_SFX
See Also:
Constant Field Values

KOPT_NO_ICON

public static final java.lang.String KOPT_NO_ICON
See Also:
Constant Field Values

KOPT_SUPPORTS_CTRL_F

public static final java.lang.String KOPT_SUPPORTS_CTRL_F
See Also:
Constant Field Values

KEY_FRAME_TITLE

public static final java.lang.String KEY_FRAME_TITLE
See Also:
Constant Field Values

KEY_RUN_AFTER

public static final java.lang.String KEY_RUN_AFTER
See Also:
Constant Field Values

KEY_ENABLED_IF_ENABLED

public static final java.lang.String KEY_ENABLED_IF_ENABLED
See Also:
Constant Field Values

KEY_OPTIONS

public static final java.lang.String KEY_OPTIONS
See Also:
Constant Field Values

KEY_NO_PAINT_IF_ADJUSTING

public static final java.lang.String KEY_NO_PAINT_IF_ADJUSTING
See Also:
Constant Field Values

KEY_COLOR

public static final java.lang.String KEY_COLOR
See Also:
Constant Field Values

KEY_GET_VIEW

public static final java.lang.String KEY_GET_VIEW
See Also:
Constant Field Values

KEY_CTRL_PNL

public static final java.lang.String KEY_CTRL_PNL
See Also:
Constant Field Values

KEY_CACHE_TEXT

public static final java.lang.String KEY_CACHE_TEXT
See Also:
Constant Field Values

KEY_CONTEXT_OBJECTS

public static final java.lang.String KEY_CONTEXT_OBJECTS
See Also:
Constant Field Values

KEY_OPTS_SCROLLPANE

public static final java.lang.String KEY_OPTS_SCROLLPANE
See Also:
Constant Field Values

ACTION_CHANGE_EVENT

public static final java.lang.String ACTION_CHANGE_EVENT
See Also:
Constant Field Values

ACTION_TABLE_CHANGED

public static final java.lang.String ACTION_TABLE_CHANGED
See Also:
Constant Field Values

ACTION_CLICKED

public static final java.lang.String ACTION_CLICKED
See Also:
Constant Field Values

ACTION_CLICKED_DOUBLE

public static final java.lang.String ACTION_CLICKED_DOUBLE
See Also:
Constant Field Values

ACTION_CLICKED_AFTER_SUPER

public static final java.lang.String ACTION_CLICKED_AFTER_SUPER
See Also:
Constant Field Values

ACTION_CLICKED_DOUBLE_AFTER_SUPER

public static final java.lang.String ACTION_CLICKED_DOUBLE_AFTER_SUPER
See Also:
Constant Field Values

ACTION_COLOR_CHANGED

public static final java.lang.String ACTION_COLOR_CHANGED
See Also:
Constant Field Values

ACTION_CUSTOMIZE_CHANGED

public static final java.lang.String ACTION_CUSTOMIZE_CHANGED
See Also:
Constant Field Values

ACTION_DATABASE_CLICKED

public static final java.lang.String ACTION_DATABASE_CLICKED
See Also:
Constant Field Values

ACTION_DELETE_OR_BACKSPACE

public static final java.lang.String ACTION_DELETE_OR_BACKSPACE
See Also:
Constant Field Values

ACTION_DOWNLOAD_PLUGIN

public static final java.lang.String ACTION_DOWNLOAD_PLUGIN
See Also:
Constant Field Values

ACTION_ENTER

public static final java.lang.String ACTION_ENTER
See Also:
Constant Field Values

ACTION_FOCUS_GAINED

public static final java.lang.String ACTION_FOCUS_GAINED
See Also:
Constant Field Values

ACTION_FOCUS_LOST

public static final java.lang.String ACTION_FOCUS_LOST
See Also:
Constant Field Values

ACTION_MENU_SELECTED

public static final java.lang.String ACTION_MENU_SELECTED
See Also:
Constant Field Values

ACTION_SELECTION_CHANGED

public static final java.lang.String ACTION_SELECTION_CHANGED
See Also:
Constant Field Values

ACTION_TEXT_CHANGED

public static final java.lang.String ACTION_TEXT_CHANGED
See Also:
Constant Field Values

ACTION_WINDOW_ACTIVATED

public static final java.lang.String ACTION_WINDOW_ACTIVATED
See Also:
Constant Field Values

ACTION_WINDOW_CLOSING

public static final java.lang.String ACTION_WINDOW_CLOSING
See Also:
Constant Field Values

ACTION_WINDOW_DEACTIVATED

public static final java.lang.String ACTION_WINDOW_DEACTIVATED
See Also:
Constant Field Values

ARRAY_CP

public static final java.lang.String ARRAY_CP
See Also:
Constant Field Values

CMD_CLEAR

public static final java.lang.String CMD_CLEAR
See Also:
Constant Field Values

CMD_MENU_SELECTION_CHANGED

public static final java.lang.String CMD_MENU_SELECTION_CHANGED
See Also:
Constant Field Values

CMD_MIDDLE_MOUSE_BUTTON

public static final java.lang.String CMD_MIDDLE_MOUSE_BUTTON
See Also:
Constant Field Values

DO_NOT_ASK

public static final java.lang.String DO_NOT_ASK
See Also:
Constant Field Values

FEATURE_ACTIVE_SITE

public static final java.lang.String FEATURE_ACTIVE_SITE
See Also:
Constant Field Values

KEEP_DAYS_IN_CACHE

public static final java.lang.String KEEP_DAYS_IN_CACHE
See Also:
Constant Field Values

KEY_ACCELERATOR

public static final java.lang.String KEY_ACCELERATOR
See Also:
Constant Field Values

KEY_ACTION_COMMAND

public static final java.lang.String KEY_ACTION_COMMAND
See Also:
Constant Field Values

KEY_BACKGROUND

public static final java.lang.String KEY_BACKGROUND
See Also:
Constant Field Values

KEY_FOREGROUND

public static final java.lang.String KEY_FOREGROUND
See Also:
Constant Field Values

KEY_CLASS_NAME

public static final java.lang.String KEY_CLASS_NAME
See Also:
Constant Field Values

KEY_IMAGE_FILE_NAME

public static final java.lang.String KEY_IMAGE_FILE_NAME
See Also:
Constant Field Values

KEY_CLONED_FROM

public static final java.lang.String KEY_CLONED_FROM
See Also:
Constant Field Values

KEY_CLOSE_OPT

public static final java.lang.String KEY_CLOSE_OPT
See Also:
Constant Field Values

KEY_CLONES

public static final java.lang.String KEY_CLONES
See Also:
Constant Field Values

KOPT_DISABLE_EV

public static final java.lang.String KOPT_DISABLE_EV
See Also:
Constant Field Values

KOPT_COLOR_FROM_PARENT

public static final java.lang.String KOPT_COLOR_FROM_PARENT
See Also:
Constant Field Values

KOPT_CONTAINS_AA

public static final java.lang.String KOPT_CONTAINS_AA
See Also:
Constant Field Values

KOPT_CONTAINS_NT

public static final java.lang.String KOPT_CONTAINS_NT
See Also:
Constant Field Values

KOPT_DRAGS_PARWINDOW

public static final java.lang.String KOPT_DRAGS_PARWINDOW
See Also:
Constant Field Values

KEY_DEPENDS_ON

public static final java.lang.String KEY_DEPENDS_ON
See Also:
Constant Field Values

KEY_CLOSE_HOOKS

public static final java.lang.String KEY_CLOSE_HOOKS
See Also:
Constant Field Values

KEY_DRAG_TARGET_DIRCTORY

public static final java.lang.String KEY_DRAG_TARGET_DIRCTORY
See Also:
Constant Field Values

KEY_DROP_TARGET_REDIRECT

public static final java.lang.String KEY_DROP_TARGET_REDIRECT
See Also:
Constant Field Values

KEY_DRAG_SRC_ID

public static final java.lang.String KEY_DRAG_SRC_ID
See Also:
Constant Field Values

KEY_EMAIL

public static final java.lang.String KEY_EMAIL
See Also:
Constant Field Values

KEY_ENABLED

public static final java.lang.String KEY_ENABLED
See Also:
Constant Field Values

KEY_FEHLER_1

public static final java.lang.String KEY_FEHLER_1
See Also:
Constant Field Values

KEY_FEHLER_2

public static final java.lang.String KEY_FEHLER_2
See Also:
Constant Field Values

KEY_GET_MENUBAR

public static final java.lang.String KEY_GET_MENUBAR
See Also:
Constant Field Values

KEY_HIDE_IF_EXEC_FORBIDDEN

public static final java.lang.String KEY_HIDE_IF_EXEC_FORBIDDEN
See Also:
Constant Field Values

KEY_IF_EMPTY

public static final java.lang.String KEY_IF_EMPTY
See Also:
Constant Field Values

KEY_IGNORE_SELECTION_EVT

public static final java.lang.String KEY_IGNORE_SELECTION_EVT
See Also:
Constant Field Values

KEY_IS_PRINTING

public static final java.lang.String KEY_IS_PRINTING
See Also:
Constant Field Values

KEY_IS_RESIZING

public static final java.lang.String KEY_IS_RESIZING
See Also:
Constant Field Values

KEY_LOOKS_LIKE_DIVIDER

public static final java.lang.String KEY_LOOKS_LIKE_DIVIDER
See Also:
Constant Field Values

KEY_MENU_ID

public static final java.lang.String KEY_MENU_ID
See Also:
Constant Field Values

KEY_MODEL

public static final java.lang.String KEY_MODEL
See Also:
Constant Field Values

KEY_MODI_COUNT

public static final java.lang.String KEY_MODI_COUNT
See Also:
Constant Field Values

KEY_NEEDS_REVALIDATE

public static final java.lang.String KEY_NEEDS_REVALIDATE
See Also:
Constant Field Values

KEY_NORTH_PANEL

public static final java.lang.String KEY_NORTH_PANEL
See Also:
Constant Field Values

KEY_SOUTH_PANEL

public static final java.lang.String KEY_SOUTH_PANEL
See Also:
Constant Field Values

KEY_EAST_PANEL

public static final java.lang.String KEY_EAST_PANEL
See Also:
Constant Field Values

KEY_WEST_PANEL

public static final java.lang.String KEY_WEST_PANEL
See Also:
Constant Field Values

KEY_FRAME

public static final java.lang.String KEY_FRAME
See Also:
Constant Field Values

KOPT_NO_EVENT

public static final java.lang.String KOPT_NO_EVENT
See Also:
Constant Field Values

KEY_NOT_YET_PAINTED

public static final java.lang.String KEY_NOT_YET_PAINTED
See Also:
Constant Field Values

KOPT_ALREADY_PAINTED

public static final java.lang.String KOPT_ALREADY_PAINTED
See Also:
Constant Field Values

KOPT_IS_SELECTED

public static final java.lang.String KOPT_IS_SELECTED
See Also:
Constant Field Values

KEY_PANEL

public static final java.lang.String KEY_PANEL
See Also:
Constant Field Values

KEY_PREF_SIZE

public static final java.lang.String KEY_PREF_SIZE
See Also:
Constant Field Values

KEY_PRINTABLE_COMPONENTS

public static final java.lang.String KEY_PRINTABLE_COMPONENTS
See Also:
Constant Field Values

KEY_PROGRESS

public static final java.lang.String KEY_PROGRESS
See Also:
Constant Field Values

KEY_SCALE_FACTOR

public static final java.lang.String KEY_SCALE_FACTOR
See Also:
Constant Field Values

KEY_SCROLL_EVEN_IF_INVISIBLE

public static final java.lang.String KEY_SCROLL_EVEN_IF_INVISIBLE
See Also:
Constant Field Values

KEY_SCROLL_INCR_V

public static final java.lang.String KEY_SCROLL_INCR_V
See Also:
Constant Field Values

KEY_SCROLL_TO_END

public static final java.lang.String KEY_SCROLL_TO_END
See Also:
Constant Field Values

KEY_TIP_LOCATION

public static final java.lang.String KEY_TIP_LOCATION
See Also:
Constant Field Values

KEY_TITLE

public static final java.lang.String KEY_TITLE
See Also:
Constant Field Values

KEY_TOOLTIP

public static final java.lang.String KEY_TOOLTIP
See Also:
Constant Field Values

KOPT_UNDOCKABLE

public static final java.lang.String KOPT_UNDOCKABLE
See Also:
Constant Field Values

KOPT_DRAW_UNDOCKABLE

public static final java.lang.String KOPT_DRAW_UNDOCKABLE
See Also:
Constant Field Values

KEY_VISIBLE_COMPONENT

public static final java.lang.String KEY_VISIBLE_COMPONENT
See Also:
Constant Field Values

KOPT_IS_VALIDATE_ROOT

public static final java.lang.String KOPT_IS_VALIDATE_ROOT
See Also:
Constant Field Values

KOPT_DO_NOT_INVALIDATE

public static final java.lang.String KOPT_DO_NOT_INVALIDATE
See Also:
Constant Field Values

KOPT_DISABLE_IF_CHILDS_DISABLED

public static final java.lang.String KOPT_DISABLE_IF_CHILDS_DISABLED
See Also:
Constant Field Values

KOPT_HIDE_IF_DISABLED

public static final java.lang.String KOPT_HIDE_IF_DISABLED
See Also:
Constant Field Values

KOPT_NOT_PAINTED_IF_DISABLED

public static final java.lang.String KOPT_NOT_PAINTED_IF_DISABLED
See Also:
Constant Field Values

KOPT_IS_IN_TABLE_HEADER

public static final java.lang.String KOPT_IS_IN_TABLE_HEADER
See Also:
Constant Field Values

KOPT_NOT_FOR_MENUBAR

public static final java.lang.String KOPT_NOT_FOR_MENUBAR
See Also:
Constant Field Values

KOPT_NOT_INDICATE_TOO_SMALL

public static final java.lang.String KOPT_NOT_INDICATE_TOO_SMALL
See Also:
Constant Field Values

KOPT_TRACKS_VIEWPORT_WIDTH

public static final java.lang.String KOPT_TRACKS_VIEWPORT_WIDTH
See Also:
Constant Field Values

KOPT_TRACKS_VIEWPORT_HEIGHT

public static final java.lang.String KOPT_TRACKS_VIEWPORT_HEIGHT
See Also:
Constant Field Values

MAY_PROVIDE_TREE_VALUE

public static final java.lang.String MAY_PROVIDE_TREE_VALUE
See Also:
Constant Field Values

OPAQUE_FALSE

public static final java.lang.String OPAQUE_FALSE
See Also:
Constant Field Values

OPAQUE_TRUE

public static final java.lang.String OPAQUE_TRUE
See Also:
Constant Field Values

PROVIDE_DND_FILES

public static final java.lang.String PROVIDE_DND_FILES
See Also:
Constant Field Values

PROVIDE_HIGHLIGHTS

public static final java.lang.String PROVIDE_HIGHLIGHTS
See Also:
Constant Field Values

PROVIDE_FILES

public static final java.lang.String PROVIDE_FILES
See Also:
Constant Field Values

PROVIDE_ID_FOR_JLIST

public static final java.lang.String PROVIDE_ID_FOR_JLIST
See Also:
Constant Field Values

PROVIDE_JORTHO_WORD_LIST

public static final java.lang.String PROVIDE_JORTHO_WORD_LIST
See Also:
Constant Field Values

PROVIDE_JPopupMenu

public static final java.lang.String PROVIDE_JPopupMenu
See Also:
Constant Field Values

PROVIDE_JTREE_CHILDS

public static final java.lang.String PROVIDE_JTREE_CHILDS
See Also:
Constant Field Values

PROVIDE_JTREE_NODE_ID

public static final java.lang.String PROVIDE_JTREE_NODE_ID
See Also:
Constant Field Values

PROVIDE_TEXT_FOR_SORTING

public static final java.lang.String PROVIDE_TEXT_FOR_SORTING
See Also:
Constant Field Values

PROVIDE_WORD_COMPLETION_LIST

public static final java.lang.String PROVIDE_WORD_COMPLETION_LIST
See Also:
Constant Field Values

PUBMED_CHARITE

public static final java.lang.String PUBMED_CHARITE
See Also:
Constant Field Values

UNNAMED

public static final java.lang.String UNNAMED
See Also:
Constant Field Values

KEY_AVOID_GARBAGE_COLLECT

public static final java.lang.String KEY_AVOID_GARBAGE_COLLECT
See Also:
Constant Field Values

UPLOAD_DOC

public static final java.lang.String UPLOAD_DOC
See Also:
Constant Field Values

DOCTYPE_TUTORIAL

public static final char DOCTYPE_TUTORIAL
See Also:
Constant Field Values

DOCTYPE_HTML

public static final char DOCTYPE_HTML
See Also:
Constant Field Values

DOCTYPE_JAVADOC

public static final char DOCTYPE_JAVADOC
See Also:
Constant Field Values

DURATION

public static final int DURATION
See Also:
Constant Field Values

WHEN

public static final int WHEN
See Also:
Constant Field Values

ARRAY_DURATION

public static final int ARRAY_DURATION
See Also:
Constant Field Values

EDT

public static final int EDT
See Also:
Constant Field Values

PAUSE

public static final int PAUSE
See Also:
Constant Field Values

LEN_PDB_ID

public static final int LEN_PDB_ID
See Also:
Constant Field Values

LEN_UNIPROT

public static final int LEN_UNIPROT
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Constant Field Values

HETERO_HOH

public static final int HETERO_HOH
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Constant Field Values

HETERO_HHO

public static final int HETERO_HHO
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Constant Field Values

HETERO_OHH

public static final int HETERO_OHH
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Constant Field Values

HETERO_H2O

public static final int HETERO_H2O
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Constant Field Values

HETERO_DOD

public static final int HETERO_DOD
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Constant Field Values

HETERO_DDO

public static final int HETERO_DDO
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Constant Field Values

HETERO_ODD

public static final int HETERO_ODD
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Constant Field Values

HETERO_D2O

public static final int HETERO_D2O
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Constant Field Values

HETERO_NA

public static final int HETERO_NA
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Constant Field Values

HETERO_MG

public static final int HETERO_MG
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Constant Field Values

HETERO_NM

public static final int HETERO_NM
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Constant Field Values

HETERO_ZN

public static final int HETERO_ZN
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Constant Field Values

HETERO_SE

public static final int HETERO_SE
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Constant Field Values

HETERO_CO

public static final int HETERO_CO
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Constant Field Values

HETERO_MN

public static final int HETERO_MN
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Constant Field Values

HETERO_NI

public static final int HETERO_NI
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Constant Field Values

HETERO_FE

public static final int HETERO_FE
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Constant Field Values

HETERO_CA

public static final int HETERO_CA
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Constant Field Values

ATOM_CA

public static final int ATOM_CA
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Constant Field Values

PROTEIN_MIN_FILE_SZE

public static final int PROTEIN_MIN_FILE_SZE
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Constant Field Values

ENABLE_EVT_MASK

public static final long ENABLE_EVT_MASK
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Constant Field Values

HIGHLIGHT_STYLE_MASK

public static final long HIGHLIGHT_STYLE_MASK
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Constant Field Values

HIGHLIGHT_STYLE_RRECT

public static final long HIGHLIGHT_STYLE_RRECT
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Constant Field Values

HIGHLIGHT_STYLE_WAVE

public static final long HIGHLIGHT_STYLE_WAVE
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Constant Field Values

HIGHLIGHT_STYLE_UL

public static final long HIGHLIGHT_STYLE_UL
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Constant Field Values

HIGHLIGHT_IGNORE_CASE

public static final long HIGHLIGHT_IGNORE_CASE
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Constant Field Values

HIGHLIGHT_SKIP_BLANKS

public static final long HIGHLIGHT_SKIP_BLANKS
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Constant Field Values

HIGHLIGHT_DOT_MATCHES_ANY

public static final long HIGHLIGHT_DOT_MATCHES_ANY
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Constant Field Values

HIGHLIGHT_IGNORE_LEN_OF_BLANK

public static final long HIGHLIGHT_IGNORE_LEN_OF_BLANK
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Constant Field Values

HIGHLIGHT_REMOVE_IF_TEXT_CHANGES

public static final long HIGHLIGHT_REMOVE_IF_TEXT_CHANGES
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Constant Field Values

HIGHLIGHT_UPDATE_IF_TEXT_CHANGES

public static final long HIGHLIGHT_UPDATE_IF_TEXT_CHANGES
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Constant Field Values

HIGHLIGHT_REPAINT

public static final long HIGHLIGHT_REPAINT
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Constant Field Values

HIGHLIGHT_NOT_IN_SCROLLBAR

public static final long HIGHLIGHT_NOT_IN_SCROLLBAR
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Constant Field Values

HIGHLIGHT_UPDATE_ON_MOUSE_ENTER

public static final long HIGHLIGHT_UPDATE_ON_MOUSE_ENTER
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Constant Field Values

HIGHLIGHT_NEVER_REMOVE

public static final long HIGHLIGHT_NEVER_REMOVE
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Constant Field Values

ULREFS_PMID_DOWNLOAD

public static final long ULREFS_PMID_DOWNLOAD
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Constant Field Values

ULREFS_GO

public static final long ULREFS_GO
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Constant Field Values

ULREFS_IF_NECESSARY

public static final long ULREFS_IF_NECESSARY
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Constant Field Values

ULREFS_BG

public static final long ULREFS_BG
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Constant Field Values

ULREFS_NOT_CLICKABLE

public static final long ULREFS_NOT_CLICKABLE
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Constant Field Values

ULREFS_DISABLE

public static final long ULREFS_DISABLE
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Constant Field Values

ULREFS_DISABLE_UNTIL_MOUSE

public static final long ULREFS_DISABLE_UNTIL_MOUSE
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Constant Field Values

ULREFS_NO_ICON

public static final long ULREFS_NO_ICON
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Constant Field Values

ULREFS_WEB_COLORS

public static final long ULREFS_WEB_COLORS
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Constant Field Values

COMPLETION_DIRECTORY_PATH

public static final long COMPLETION_DIRECTORY_PATH
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Constant Field Values

COMPLETION_FILES_IN_WORKING_DIR

public static final long COMPLETION_FILES_IN_WORKING_DIR
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Constant Field Values

BUGFIX_OPENJDK_G2

public static final double BUGFIX_OPENJDK_G2
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Constant Field Values

'STRAP:multiple sequence alignments '

'The most important classes are StrapAlign, Protein and StrapEvent.'