charite.christo.interfaces
Interface SequenceDisSimilarity

All Known Implementing Classes:

CrudeSequenceDisSimilarity

public interface SequenceDisSimilarity

Compares two amino acid sequences and returns a float value This class is used by the two class SequenceDisSimilarityAsAligned and IndividualSequenceDisSimilarity. These to classes have a combo box in their controlPanel where an instance of SequenceDisSimilarity can be selected. within the Dialog DialogCompareProteins

Method Summary

double

getValue(byte[] sequence1, byte[] sequence2, int from, int to)

Method Detail

getValue

double getValue(byte[] sequence1,
                byte[] sequence2,
                int from,
                int to)