charite.christo.protein
Class Superimpose3D.Result

java.lang.Object
  charite.christo.protein.Superimpose3D.Result

Enclosing interface:

Superimpose3D

public static class Superimpose3D.Result
extends java.lang.Object

Constructor Summary

Superimpose3D.Result(int numberOfSequences)

Method Summary

Superimpose3D.Result	changeOrder(java.lang.Object[] current, java.lang.Object[] ordered)
byte[][]	getGappedSequences()
int[]	getIndicesOfSequences()
Matrix3D	getMatrix()
float	getRmsd()
float	getScore()
void	setGappedSequences(byte[][] ss)
void	setIndicesOfSequences(int[] ii)
void	setMatrix(Matrix3D m)
void	setRmsd(double s)
void	setScore(double s)
BA	toText(BA sb0, long options)

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Superimpose3D.Result

public Superimpose3D.Result(int numberOfSequences)

Method Detail

setMatrix

public void setMatrix(Matrix3D m)

getMatrix

public Matrix3D getMatrix()

setGappedSequences

public void setGappedSequences(byte[][] ss)

getGappedSequences

public byte[][] getGappedSequences()

getIndicesOfSequences

public int[] getIndicesOfSequences()

setIndicesOfSequences

public void setIndicesOfSequences(int[] ii)

getScore

public float getScore()

getRmsd

public float getRmsd()

setScore

public void setScore(double s)

setRmsd

public void setRmsd(double s)

toText

public BA toText(BA sb0,
                 long options)

changeOrder

public Superimpose3D.Result changeOrder(java.lang.Object[] current,
                                        java.lang.Object[] ordered)