charite.christo.strap.extensions
Class AbstractBlasterHTTP

java.lang.Object
  charite.christo.strap.extensions.AbstractBlaster
      charite.christo.strap.extensions.AbstractBlasterHTTP

All Implemented Interfaces:

CacheResult.Cacheable, ChRunnable, Disposable, HasControlPanel, NeedsInternet, SequenceBlaster, ActionListener, EventListener

Direct Known Subclasses:

Blaster_ebi_ac_uk

public abstract class AbstractBlasterHTTP
extends AbstractBlaster
implements NeedsInternet

This class is extended by Blaster classes that call Web blast services e.g. at http://www.ebi.ac.uk. Advantage over local blast installation: nothing needs to be installed. Disadvantage: it is much slower than a local BLAST installation.

Nested Class Summary

Nested classes/interfaces inherited from class charite.christo.strap.extensions.AbstractBlaster

AbstractBlaster.Result

Field Summary

Fields inherited from class charite.christo.strap.extensions.AbstractBlaster

isAAQuery, matrix, urlResultHtml

Fields inherited from interface charite.christo.interfaces.ChRunnable

APPEND, DOWNLOAD_FINISHED, INTERPRET_LINE, LOG, SET_ICON_IMAGE

Constructor Summary

AbstractBlasterHTTP()

Method Summary

Container	getControlPanel()
String	toString()

Methods inherited from class charite.christo.strap.extensions.AbstractBlaster

actionPerformed, butViewTxt, butViewXml, compute, computeIt, dispose, getAvailableMatrices, getBlastProgram, getCacheClass, getCacheKey, getCacheSection, getDatabase, getMatrix, getNumberOfAlignments, getQuery, getQuerySequence, getResultXml, isAAQuery, isDisposed, log, run, setAAQuerySequence, setDatabase, setMatrix, setNTQuerySequence, setNumberOfAlignments, urlResultHtml

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface charite.christo.interfaces.SequenceBlaster

getAvailableDatabases

Constructor Detail

AbstractBlasterHTTP

public AbstractBlasterHTTP()

Method Detail

getControlPanel

public Container getControlPanel()

Specified by:

getControlPanel in interface HasControlPanel

Specified by:

getControlPanel in class AbstractBlaster

toString

public String toString()

Overrides:

toString in class Object