'STRAP:multiple sequence alignments '

charite.christo.strap.extensions
Class AlignmentScore

java.lang.Object
  extended by charite.christo.strap.AbstractAlignAndCompare
      extended by charite.christo.strap.extensions.AlignmentScore
All Implemented Interfaces:
Disposable, HasControlPanel, HasModiCount, HasSharedControlPanel, NeedsSharedInstance, HasProtein, StrapListener, ValueOfProtein, ProteinProteinSimilarity, ProteinProteinValue

public class AlignmentScore
extends AbstractAlignAndCompare
implements ProteinProteinSimilarity


Field Summary
 
Fields inherited from interface charite.christo.Disposable
NONE
 
Constructor Summary
AlignmentScore()
           
 
Method Summary
 
Methods inherited from class charite.christo.strap.AbstractAlignAndCompare
comboClass, compute, dispose, getCalculator, getControlPanel, getOtherClass, getOtherProtein, getProtein, getSharedControlPanel, getSharedInstance, getValue, handleEvent, modificationCount, setColumnRange, setOtherClass, setOtherProtein, setProtein, setSharedInstance
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 
Methods inherited from interface charite.christo.strap.ProteinProteinValue
compute, getOtherProtein, getValue, setColumnRange, setOtherProtein
 
Methods inherited from interface charite.christo.protein.ValueOfProtein
setProtein
 
Methods inherited from interface charite.christo.protein.HasProtein
getProtein
 
Methods inherited from interface charite.christo.HasModiCount
modificationCount
 

Constructor Detail

AlignmentScore

public AlignmentScore()

'STRAP:multiple sequence alignments '

'The most important classes are StrapAlign, Protein and StrapEvent.'