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'STRAP:multiple sequence alignments ' | ||||||||
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java.lang.Object charite.christo.strap.extensions.Superimpose_Goede
public class Superimpose_Goede
Nested Class Summary |
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Nested classes/interfaces inherited from interface charite.christo.protein.Superimpose3D |
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Superimpose3D.Result |
Field Summary |
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Fields inherited from interface charite.christo.protein.Superimpose3D |
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COLUMN_SEQUENCE, NO_BYTE, PARSE_ALIGNMENT, PARSE_MATRIX, PARSE_MSA_START_S, PARSE_SCORE, PRINT_HUMAN_READABLE |
Constructor Summary | |
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Superimpose_Goede()
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Method Summary | |
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void |
compute()
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long |
getOptions()
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Protein[] |
getProteins()
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Superimpose3D.Result |
getResult()
returns a 3X3 rotation matrix and a translation vector. |
void |
setOptions(long optionFlags)
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void |
setProteins(Protein... pp)
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Methods inherited from class java.lang.Object |
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equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
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public Superimpose_Goede()
Method Detail |
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public void setProteins(Protein... pp)
setProteins
in interface NeedsProteins
public Protein[] getProteins()
getProteins
in interface Superimpose3D
public Superimpose3D.Result getResult()
Superimpose3D
getResult
in interface Superimpose3D
public void compute()
compute
in interface Superimpose3D
public void setOptions(long optionFlags)
setOptions
in interface Superimpose3D
public long getOptions()
getOptions
in interface Superimpose3D
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