charite.christo.blast
Class BlastParser
java.lang.Object
charite.christo.blast.BlastParser
public class BlastParser
- extends java.lang.Object
You probably do not need to use this class directly.
Better use class BlastResult.
Methods inherited from class java.lang.Object |
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
URL_EBI
public static final int URL_EBI
- See Also:
- Constant Field Values
BlastParser
public BlastParser()
countNovelHits
public int countNovelHits()
countHits
public int countHits()
setDay
public void setDay(BA ba,
boolean isNew)
parseXML
public boolean parseXML(BA ba,
int width,
BlastResult blastResult)
parseXML
public boolean parseXML(BA ba,
int width,
java.io.OutputStream fOut)
addToProteinDatabases
public static void addToProteinDatabases(int type,
java.lang.String[] db)
'The most important classes are StrapAlign, Protein and StrapEvent.'