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'STRAP:multiple sequence alignments ' | ||||||||
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public interface ResidueSelection
HELP PACKAGE:charite.christo.strap. Residue selections are objects attached to proteins which select one or more amino acid positions from the amino acid sequence. They usually have color, style attributes and a balloon message. They may be shown in the alignment (1D) and in the built in 3D-wire-frame (3D) and the scrollbar view-port (VP). Selections are created in different ways:
Field Summary | |
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static ResidueSelection[] |
NONE
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Method Summary | |
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Protein |
getProtein()
Usually, the protein reference which is stored in an instance variable is returned. |
boolean[] |
getSelectedAminoacids()
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int |
getSelectedAminoacidsOffset()
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boolean |
setProtein(Protein p)
Usually, an instance variable is set with the given protein. |
void |
setSelectedAminoacids(boolean[] bb,
int offset)
The selected residues might be initialized. |
Field Detail |
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static final ResidueSelection[] NONE
Method Detail |
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boolean setProtein(Protein p)
p
- a reference to the protein object.Protein getProtein()
boolean[] getSelectedAminoacids()
int getSelectedAminoacidsOffset()
void setSelectedAminoacids(boolean[] bb, int offset)
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