'STRAP:multiple sequence alignments '

charite.christo.protein
Class AbstractValueOfResidue

java.lang.Object
  extended by charite.christo.protein.AbstractValueOfResidue
All Implemented Interfaces:
Colored, HasModiCount, HasProtein, ValueOfResidue
Direct Known Subclasses:
Hydrophobicity, ResidueHydrophobicity_TOPPRED

public abstract class AbstractValueOfResidue
extends java.lang.Object
implements ValueOfResidue, Colored


Constructor Summary
AbstractValueOfResidue()
           
 
Method Summary
 java.awt.Color getColor()
           
 Protein getProtein()
           
 java.lang.Object getSharedInstance()
           
 int modificationCount()
           
 void setColor(java.awt.Color c)
           
 void setProtein(Protein p)
           
 void setSharedInstance(java.lang.Object shared)
           
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 
Methods inherited from interface charite.christo.protein.ValueOfResidue
getValues
 

Constructor Detail

AbstractValueOfResidue

public AbstractValueOfResidue()
Method Detail

getProtein

public Protein getProtein()
Specified by:
getProtein in interface HasProtein

setProtein

public void setProtein(Protein p)
Specified by:
setProtein in interface ValueOfResidue

modificationCount

public int modificationCount()
Specified by:
modificationCount in interface HasModiCount

setSharedInstance

public void setSharedInstance(java.lang.Object shared)

getSharedInstance

public java.lang.Object getSharedInstance()

getColor

public java.awt.Color getColor()
Specified by:
getColor in interface Colored

setColor

public void setColor(java.awt.Color c)
Specified by:
setColor in interface Colored

'STRAP:multiple sequence alignments '

'The most important classes are StrapAlign, Protein and StrapEvent.'