charite.christo.strap.interfaces
Interface ValueOfAlignPosition

All Known Implementing Classes:

AlignmentEntropy, DialogPlot

public interface ValueOfAlignPosition

Plugins that return a numeric value for each position (column) in the alignment or null. These are plotted in the alignment pane. It should notify changes by dispatching events of type JAVADOC:ProteinEvent#VALUE_OF_ALIGN_POSITION_CHANGED and dispatching it with JAVADOC:StrapEvent#run().

Method Summary

int	getModificationCount() Increment value when new values are computed.
StrapProtein[]	getProteins()
double[]	getValues()
void	setProteins(StrapProtein... proteins)

Method Detail

setProteins

void setProteins(StrapProtein... proteins)

getProteins

StrapProtein[] getProteins()

getValues

double[] getValues()

getModificationCount

int getModificationCount()

Increment value when new values are computed.