charite.christo.strap.interfaces
Interface StackedAlignment

All Superinterfaces:

ProteinAlignment

All Known Implementing Classes:

DefaultStackedAlignment, StrapView

public interface StackedAlignment
extends ProteinAlignment

The Model of an alignment window One row can have several Proteins. Thi first protein in each row is the "visible" one in the view

Method Summary

Gaps2Columns	gap2col()
StrapProtein[]	getProteinsInRow(int row)

Methods inherited from interface charite.christo.interfaces.ProteinAlignment

countRows, findRow, getProtein, getProteins

Method Detail

getProteinsInRow

StrapProtein[] getProteinsInRow(int row)

gap2col

Gaps2Columns gap2col()