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All Classes
Hierarchy For Package charite.christo.metannogen
Package Hierarchies:
All Packages
Class Hierarchy
java.lang.
Object
charite.christo.metannogen.
AnalyzeDatasets
charite.christo.metannogen.
BraceExpansion
charite.christo.metannogen.
Columns
charite.christo.metannogen.
CombineDatasets
charite.christo.metannogen.
ComparatorSortReactions
(implements java.util.
Comparator
<T>)
java.awt.
Component
(implements java.awt.image.
ImageObserver
, java.awt.
MenuContainer
, java.io.
Serializable
)
java.awt.
Container
javax.swing.
JComponent
(implements java.io.
Serializable
)
javax.swing.
AbstractButton
(implements java.awt.
ItemSelectable
, javax.swing.
SwingConstants
)
javax.swing.
JButton
(implements javax.accessibility.
Accessible
)
charite.christo.
ChButton
(implements java.awt.event.
ActionListener
, charite.christo.interfaces.
ChRunnable
, charite.christo.interfaces.
HasRendererComponent
, java.lang.
Runnable
)
charite.christo.metannogen.
MetannogenGoogleReaction
(implements java.awt.event.
ActionListener
, charite.christo.interfaces.
IsEnabled
)
javax.swing.
JPanel
(implements javax.accessibility.
Accessible
)
charite.christo.
ChPanel
(implements javax.swing.
Scrollable
)
charite.christo.metannogen.
AbstractDatasetView
(implements charite.christo.interfaces.
ChProcessEvent
, charite.christo.interfaces.
ChRunnable
, charite.christo.metannogen.
DatasetView
, charite.christo.interfaces.
PaintHook
)
charite.christo.metannogen.
PathwayViews
(implements java.awt.event.
ActionListener
, charite.christo.interfaces.
Disposable
, charite.christo.interfaces.
HasPanel
)
javax.swing.
JTree
(implements javax.accessibility.
Accessible
, javax.swing.
Scrollable
)
charite.christo.
ChJTree
(implements javax.swing.event.
TreeSelectionListener
)
charite.christo.metannogen.
MetannogenTree
(implements javax.swing.tree.
TreeModel
)
charite.christo.metannogen.
CompoundSumFormula
charite.christo.metannogen.
Dataset
(implements charite.christo.interfaces.
ChRunnable
, charite.christo.interfaces.
Colored
, charite.christo.
DialogStringMatch.Interface
, charite.christo.interfaces.
HasID
, charite.christo.metannogen.
HasInfoText
, charite.christo.interfaces.
HasRendererText
, charite.christo.
TabItemTipIcon.Interface
)
charite.christo.metannogen.
Dataset2Reaction
(implements charite.christo.interfaces.
ChRunnable
)
charite.christo.metannogen.
DatasetToText
charite.christo.metannogen.
DatasetUtils
(implements java.awt.event.
ActionListener
, java.util.
Comparator
<T>)
charite.christo.metannogen.
DatasetViewUtils
(implements java.awt.event.
ActionListener
, java.awt.event.
KeyListener
)
charite.christo.metannogen.
DialogConvertEnsgToRid
(implements java.awt.event.
ActionListener
, java.lang.
Runnable
)
charite.christo.metannogen.
DialogHighlightInPathway
(implements java.awt.event.
ActionListener
, charite.christo.interfaces.
ChRunnable
, charite.christo.interfaces.
PaintHook
)
charite.christo.metannogen.
EC_Class
(implements charite.christo.interfaces.
Colored
, java.lang.
Comparable
<T>, charite.christo.
DialogStringMatch.Interface
, charite.christo.interfaces.
HasChildren
, charite.christo.interfaces.
HasID
, charite.christo.metannogen.
HasInfoText
, charite.christo.interfaces.
HasName
, charite.christo.interfaces.
HasRendererText
, charite.christo.
TabItemTipIcon.Interface
)
charite.christo.metannogen.
ExpressionData2
(implements charite.christo.interfaces.
ChProcessEvent
, charite.christo.interfaces.
PaintHook
, charite.christo.interfaces.
TooltipProvider
)
charite.christo.metannogen.
ExpressionDataSpecialTools
(implements java.awt.event.
ActionListener
, java.util.
Comparator
<T>)
charite.christo.metannogen.
FluxData
(implements java.awt.event.
ActionListener
, charite.christo.interfaces.
ChRunnable
, charite.christo.interfaces.
PaintHook
, charite.christo.interfaces.
TooltipProvider
)
charite.christo.metannogen.
KeggFloatData
(implements java.lang.
Runnable
)
charite.christo.metannogen.
KeggLoader
charite.christo.metannogen.
MapEnsgKO
(implements java.lang.
Runnable
)
charite.christo.metannogen.
Metannogen
(implements charite.christo.interfaces.
ChRunnable
)
charite.christo.metannogen.
MetannogenFrame
(implements java.awt.event.
ActionListener
, java.awt.event.
KeyListener
, java.awt.event.
MouseListener
)
charite.christo.metannogen.
MetannogenStatics
(implements java.awt.event.
ActionListener
, charite.christo.interfaces.
ChRunnable
, java.awt.event.
FocusListener
, java.awt.event.
MouseListener
, java.awt.event.
MouseMotionListener
, charite.christo.interfaces.
TooltipProvider
)
charite.christo.metannogen.
MetannogenTreeSelection
(implements javax.swing.event.
TreeSelectionListener
)
charite.christo.metannogen.
MetannogenUserScripts
(implements java.awt.event.
ActionListener
)
charite.christo.metannogen.
MObject
(implements java.lang.
Cloneable
, charite.christo.
DialogStringMatch.Interface
, charite.christo.interfaces.
HasID
, charite.christo.interfaces.
HasName
)
charite.christo.metannogen.
MReaction
(implements charite.christo.interfaces.
Colored
, charite.christo.
DialogStringMatch.Interface
, charite.christo.interfaces.
HasChildren
, charite.christo.interfaces.
HasID
, charite.christo.metannogen.
HasInfoText
, charite.christo.interfaces.
HasRendererText
, charite.christo.metannogen.
Reaction
, charite.christo.
TabItemTipIcon.Interface
)
charite.christo.metannogen.
MSpecies
(implements charite.christo.interfaces.
ChCustomDictionaryProvider
, java.lang.
Comparable
<T>, charite.christo.
DialogStringMatch.Interface
, charite.christo.interfaces.
HasChildren
, charite.christo.metannogen.
HasInfoText
, charite.christo.interfaces.
HasRendererText
, charite.christo.metannogen.
Species
, charite.christo.
TabItemTipIcon.Interface
)
java.awt.event.
MouseAdapter
(implements java.awt.event.
MouseListener
, java.awt.event.
MouseMotionListener
, java.awt.event.
MouseWheelListener
)
charite.christo.metannogen.
EquationPopup
(implements java.awt.event.
ActionListener
)
charite.christo.metannogen.
MetannogenMain
(implements java.awt.event.
ActionListener
, charite.christo.interfaces.
ChRunnable
)
charite.christo.metannogen.
MReactionCollection
(implements charite.christo.interfaces.
ChCustomDictionaryProvider
, charite.christo.metannogen.
ReactionCollection
)
charite.christo.metannogen.
MReactionUtils
charite.christo.metannogen.
MSearchReplace
(implements java.awt.event.
ActionListener
)
charite.christo.metannogen.
MSpreadSheet
charite.christo.metannogen.
PalssonCompareKegg
charite.christo.metannogen.
Pathway
(implements charite.christo.interfaces.
Colored
, java.lang.
Comparable
<T>, charite.christo.
DialogStringMatch.Interface
, charite.christo.interfaces.
HasChildren
, charite.christo.interfaces.
HasID
, charite.christo.metannogen.
HasInfoText
, charite.christo.interfaces.
HasName
, charite.christo.interfaces.
HasRendererText
)
charite.christo.metannogen.
ReactionCollectionUtils
charite.christo.metannogen.
ReplaceInComment
charite.christo.metannogen.
SBML_loader
charite.christo.metannogen.
SBML_preprocessor
charite.christo.metannogen.
SuggestTransporters
(implements java.awt.event.
ActionListener
, java.lang.
Runnable
)
charite.christo.metannogen.
Swissprot
charite.christo.metannogen.
UploadDatasets
(implements charite.christo.interfaces.
ChRunnable
)
charite.christo.metannogen.
VerifyDatasets
Interface Hierarchy
java.lang.
Comparable
<T>
charite.christo.metannogen.
Species
(also extends charite.christo.interfaces.
HasID
)
charite.christo.interfaces.
Disposable
charite.christo.metannogen.
DatasetView
charite.christo.interfaces.
HasID
charite.christo.metannogen.
Species
(also extends java.lang.
Comparable
<T>)
charite.christo.metannogen.
HasInfoText
charite.christo.metannogen.
MSpreadSheet.Interface
charite.christo.metannogen.
MSpreadSheet.InterfaceBoolean
charite.christo.metannogen.
Reaction
charite.christo.metannogen.
ReactionCollection
Overview
Package
Class
Tree
Deprecated
Index
Help
'STRAP:
multiple sequence alignments
'
PREV
NEXT
FRAMES
NO FRAMES
All Classes
'The most important classes are StrapAlign, StrapProtein and StrapEvent.'